G196783


Basic Information

Item Value
gene id G196783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85451916 ~ 85452121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU222758
TGAAAGATGTAACCGTTTTAATATAATTTCAGTGACAGCCTTTTAGAAGATTGATTACTGACATTATTGCAACAATGCAAATCTCTGTATGTCAAATAATTGCCATTTCAAAATAGTGTGCATGACTTTGTATgtgcatattttttatttaactaggcaagtcagttaagaacaaattcttattttcaatgatggcctaggaacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222758 True 206 lncRNA 0.31 1 85451916 85452121

Neighbor

gene id symbol gene type direction distance location
LOC110498083 LOC106561381 coding upstream 84354 85206278 ~ 85367562 (+)
LOC118937296 NA coding upstream 253814 85196609 ~ 85198102 (+)
LOC110498064 NA coding upstream 257088 85192014 ~ 85194828 (+)
LOC110498034 LOC106573178 coding upstream 397524 85010068 ~ 85054392 (+)
LOC110498015 LOC106561386 coding upstream 910255 84424371 ~ 84541661 (+)
LOC110498095 fam180a coding downstream 12933 85465054 ~ 85470682 (+)
LOC110498104 LOC106561378 coding downstream 63498 85515619 ~ 85594581 (+)
LOC110498123 LOC106561377 coding downstream 248649 85700770 ~ 85711408 (+)
agk LOC106561375 coding downstream 275863 85727984 ~ 85734628 (+)
wee2 LOC106561372 coding downstream 296640 85748761 ~ 85754211 (+)
G196781 NA non-coding upstream 2466 85449126 ~ 85449450 (+)
G196522 NA non-coding upstream 58861 85388082 ~ 85393055 (+)
G196353 NA non-coding upstream 300124 85149455 ~ 85151792 (+)
G196338 NA non-coding upstream 324314 85127401 ~ 85127602 (+)
G196326 NA non-coding upstream 332487 85119145 ~ 85119429 (+)
G196788 NA non-coding downstream 5787 85457908 ~ 85458134 (+)
G196791 NA non-coding downstream 8716 85460837 ~ 85461528 (+)
G196816 NA non-coding downstream 49770 85501891 ~ 85502224 (+)
G196877 NA non-coding downstream 150452 85602573 ~ 85603490 (+)
G196905 NA non-coding downstream 323367 85775488 ~ 85777938 (+)
G195155 NA other upstream 851592 84596410 ~ 84600324 (+)
G194395 NA other upstream 1892318 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 2326951 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 2797486 82652633 ~ 82654430 (+)
G197069 NA other downstream 683495 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1585390 87037511 ~ 87039236 (+)
G198575 NA other downstream 1698081 87150202 ~ 87150490 (+)
G198784 NA other downstream 2041502 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 2083815 87535936 ~ 87536928 (+)

Expression


Co-expression Network