Gene
RNA
| Item | Value |
|---|---|
| gene id | G197394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 85640538 ~ 85684526 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: FYVE, RhoGEF and PH domain-containing protein 4-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223427 | True | 551 | lncRNA | 0.50 | 2 | 85640538 | 85684526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498116 | LOC106561379 | coding | downstream | 95066 | 85538383 ~ 85545472 (-) |
| LOC110502232 | LOC106561380 | coding | downstream | 152742 | 85470939 ~ 85487796 (-) |
| LOC110498041 | LOC106561383 | coding | downstream | 537753 | 85058747 ~ 85102785 (-) |
| LOC110498022 | LOC106561385 | coding | downstream | 729660 | 84596433 ~ 84910878 (-) |
| LOC110502226 | LOC106573176 | coding | downstream | 1055131 | 84556466 ~ 84585407 (-) |
| LOC118936851 | NA | coding | upstream | 12894 | 85697420 ~ 85699798 (-) |
| LOC110502240 | nup205 | coding | upstream | 27013 | 85711539 ~ 85726478 (-) |
| dennd11 | kiaa1147 | coding | upstream | 49733 | 85734259 ~ 85748399 (-) |
| bcl2l13 | LOC106561371 | coding | upstream | 81562 | 85766088 ~ 85802952 (-) |
| LOC110502245 | NA | coding | upstream | 119152 | 85803678 ~ 85804353 (-) |
| G197328 | NA | non-coding | downstream | 156913 | 85483027 ~ 85483625 (-) |
| G196784 | NA | non-coding | downstream | 188455 | 85451850 ~ 85452083 (-) |
| G196757 | NA | non-coding | downstream | 206383 | 85431738 ~ 85434155 (-) |
| G196750 | NA | non-coding | downstream | 211890 | 85428237 ~ 85428648 (-) |
| G196746 | NA | non-coding | downstream | 213722 | 85421946 ~ 85426816 (-) |
| G197441 | NA | non-coding | upstream | 67915 | 85752441 ~ 85754218 (-) |
| G197498 | slc25a18 | non-coding | upstream | 146713 | 85831239 ~ 85843493 (-) |
| G197552 | LOC106561360 | non-coding | upstream | 342364 | 86026890 ~ 86043305 (-) |
| G197613 | NA | non-coding | upstream | 389747 | 86074273 ~ 86074839 (-) |
| G197636 | LOC106561359 | non-coding | upstream | 424537 | 86109063 ~ 86109468 (-) |
| G195486 | LOC106573171 | other | downstream | 1658371 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 1736087 | 83881540 ~ 83904451 (-) |
| G194491 | NA | other | downstream | 2024504 | 83615566 ~ 83616034 (-) |
| LOC110502187 | NA | other | downstream | 2417394 | 83219964 ~ 83223972 (-) |
| G197554 | NA | other | upstream | 275319 | 85959845 ~ 85963665 (-) |
| G198342 | LOC100194703 | other | upstream | 1218510 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 1637613 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 3922311 | 89606837 ~ 89609890 (-) |
