G197498 (slc25a18)


Basic Information

Item Value
gene id G197498
gene name slc25a18
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85831239 ~ 85843493 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223543
TAATGCTGACTACACTGCCATGAGAAGTCTAAAATGTGTCCGGCAATTCAAAGCAATTGGTCCACCTTTCACAGAGATCCTTTTCGTTTCATGAAAAAGGACAACCTCCACATTGGCTTTTCTCCCCAGTGAGTTTCTTTCCCATCCGTGAGTCCAGAGTTGTAATCTTGGACTCCTCCAGTTAATGCTTTAATCCTAGTCTCTGTACTGTAACCCACTGAACAGCCAGGCTCCTCTCCTACAGGTTAAGACTGTTGGGCCTGCACTCAGAAGTCTTACCTTCCTGTTCTCCACAACTGTAACTGTTAGCTTGTTTTTTAATGCATCTTTGAATTATATGTCATGCAAACAATAAAAATTATGCAAATAAAGCCTTATTTCTGCTGATGGAGTCTCGTCCTAAACATCTTGCATTTATCTTACACATTTTGGAATTCAGCAGAAGTTAGTTTGATGTACAACTTAGTATAGCCTATGATAAGATCCATTTAAAAAAGTACCAGGTTCTTGCCAACGCACTTTGGATTAAGTCCACTAGGTGGCAATGAAAGCATtttgttttatacattttatGATAGGGTTGGAATAACTATTTTATTCTTCATTGGAGAACATCTGAATTGAATGAACAATCTGTGTACAAACAGTGAATATTCATGTTTCTTTGTTGCATATGTATTGTTAATCACATGGGTAACAACAAAAGACATTCATTCTCCAATCCAATATGTTCCCACTcaacacacaaaatacacaaaCATCAAAAGGAATAGCGGCAGCCACCCTGTTAGGTGTTTGGACACCTTACAGTAAACAAAAATAACTTGATTATTCCTCAAGGGAAAGTAAGGGGACAATCAGACAACCCTTAGTGATGGGAGGGGAGCAGTGGTAAACTGAGGAGGTAGTATAAAACACTTGTGAAAGCCACCTACCCTTAACACCAGACAACACACATTCTCCCTCACATCGTGTCTCATAACAGTTTCTTACTTTGGAAGATCATATAGATAAGTGCTTAAAGTTGGGAAGATCAGAGAAAGGGTGTTCTTAGGCTCTGCTCAACTTTCAACATATCCAGCCCAAATGAGACGCTTGTTCGCAGTAACACTTCCAATGATCCCTTAACCTTTGTCTCCAACAGCATCACCATCTTTTAGTCCAAAAACTTACGGTTCGGGTTGGCACCGAACAGAGCCGTTCTGACCTCAGGCATCATCTGCTGGGCCATGAGGTCTAGCCTGCTCTCCAGGGTGTTGGCTACCTTGATCTTCCCATTAGCGTTGTACATCTCAATACCTCCAGAGATGTCTGGTGAAAGATGCCGGTCTTGGTCAATGCCAACTTCAATTTTGCTCTTCACAGCAGCTTTATAGATGGGGATATTTTTCTGAACAGCAGCCTGCACCATGGCAATGTCCTGCTGCCGGCAGCGAATTATCACTTTGGGCTCCAGCAGTTGGTAGAATCCCTGCAGAACTAGCCCCTCCAACAACGCAGGGTACCTCGCCGGGTCCTTGGCAATGTTAGCCAGCCTCTGACGAGCCTCAGTTAGCAGATCCGAAATCATGTCATCACGAGCTTTCAGCACCTTCAGTCGAGCCAGGTTCATCAGGTTGGACATCTGAATTTTCTTCTGCTGGTCTATCTGCTTTTCTTTTTTCTCATAGTACTCCATGATCTTGAGcctttgtgtctgcaccagacggCCCTTCTCAATGTTGAACTCCTCTTCTGCCTTTGCATCAATTTCTTCTGCTTTCTCATTGGCTTCCTGTTCAATGAAGGCCATCATATGCTTGATCTGTTTCTGTACGTCGGCATCGCTGAGCGCCATGGCTGGTtcttcagttgttgttttttgcttACTAATAAAGGTAGCTAGAAAACAACTGACTAATAATAATCAGCTACTTGATTTGACTAAATAGATTTTCAGTTGCTCATACACGACGTAAAAACATGGGCCTAATGACAAGCAACAAACTGGCACTGGATGTCAGCTGACTGGGTGACAGAGAACTGCG
>TU223542
CATTGTTGAAGTGAAAGGAACGTGGACAGCTTGATCCTGCTTGTGGGATGCACTGACAGGGGGGACTAGTGTGAATGGAACGGAGCTGAAAGAAAGTTTCACAGAGCGGCTCAGTGAAAGGCATGTGCAGAATGTGACTGACTGGGCACTAGAAAAGACTGAGCTGTAAGATGAAAGGGATCCCGAGGAACGGTTAGGAGGATGGTTGTGGTGGAAGATAAGAACTGAGGAGAAATCAAGAGAATGGTGTCAAAACAAagTCCTTTGGAAATGGTGGATCTCAAACACAACTAAAGGAAACTGacagagaccactgGTATTCCTGTGAGGCACAGCAGAGCAGGAATACTGGCCAGAGGACACCGGTTAAGCTCAGGTGGTGGGTGCCACAAAATACAGGGGAGAGGAACGCTATTGGTTCCCCACCGTGGAAGAACAGACACCACATTGATACCATAGAGGTGGCAAGTTGCATTTGTGCTGGAGACAGATGGGTCGATAAGGGTACGGTAGTGGTGATAACACCTTTGGGCTGAGCTGCTGTGCCgatgggagaaggaggaggaaggaaacCGAAGTGGGCCTGGAGCCCAATGAGAGACAGGATGGCTGAGCAGAAAGTTAGCCTCCCTGCTAAGCTGATTAATGGGGGCGTGACAGGGCTGGTGGGTGTGAGCTGTGTGTTTCGTAATGATCGGGCCAAGACCCGCCTACAGAACCAGCAGGGTGCCCGAGTCCACACCGGAATgagactgaaaatatttgtcatgggtcccctgatcctcaaaagtttctacagctgcaccattaagagcatcctgaccggttgcatcactgctcgacatctgaccataaggcgctacagagCTGCACTGTTggtcaagggcttGCTGGACTGTTTGACGAAGACAGTAAAGATGGAAGGCTACTTTGGGATATATCGAGGTGCAGTAGTGAATCTCACTCGTCGCACCAGAGAATGCCATTAAACTGTCAGCAAATTATATCTTCAGACAGAAGCTCTCCAAGGACGGGAAACTAACTTTTTGTCCTAGCACAGCACTTACACTTTTAACTATTTAACTGAAACATAAATTGACATACCTTAGAGTAGTTTTTTATCCATCAAGTTAACATAACATTCATGTAATGAAGTCAGACGAACTAAGGTGCTATTGCTACAGTAAACTGTCTCATTTTATCAGGGGTAGTgccattattgttattattgctaTGTGTCTATTTATTAGTCTGTTAACCCTGTCATTTGGCCCACAGGAAGTTGCCCCTGTGGGGGGAGATACTGGCAGGATGCGGTGCGGAGACCTGCCAGATGATAGTGACCACACCCATGGAGATGCTCAAGATCCATTTGCAGGACGCAGGAAGctgaCATAAGCATAGTGGTCCAAGCAGAGTGGTCCAAGCACACACTGCAGCTTCTGGTCCAGCTCCTGGTCCATCTCCTCCAGCCCAGCCTGCCCCTCCACCTCGGACCCCTGCCGTCCGTATTACCCTGGAGCTACTGAAGACACGTGGCCTGCCAGGCCTCTACCGGGGAGCAGGAGCCACACTGATGAGGGATTTTCCTTTCTCTATGATCTACTTCCCGCTGTTCACCAACCTGAACACGCTGGGAAGGGCCGAGTAGTCATGGAGACTTGCAGGAGCGGGCCCCATTCCTGCAGTCCTTCACTGCAGGCTGCACAGCCGGATCAGTGGCAGCTGTAGCTGTCACACCACTTGACggtgagagacagaggcagggaagGGCTGGGGGAGCCCCATAAAGGAGAGATAAACCACTGTATTCAGTAGCAGTGCATGTCATTCAGTCCTAAATGTTAATGTCCACAATAAGACCATCTAATCTGTAGATGTCATACAGGAGCAGTTTGTAAGGGCTGATTCCTGTGTTGGGTTGGGATTGCAAAGGCTATTTAATTTGATTAGCGGATTACAATTCAATTATACCATGAGACCCCAATTACAATGGTATGAAATACATTATCAATAACTCTGCAATCCCAGAGCATGATATCCACATTGTCTGTACTTTAAGGGCAGTTGAGTTTACAttggtttcagtgtgtgtgtgcagtcataAAGACTCGTATACAGACCTTGCAGAAGGGGGAGGACACATACCGTGGCATTGTTGACTGCACACGGAGGATCTGGAGTAAAGGGCCCAGCAACATTCCTCAATGGGGCAACTAGTCGCGCACTGGTCATCGACCCCCTCTTTGGCATCGCACAGGGGGTCTACTTCCTGGGTGTAGGAGAGCAGTTGCTAGGGCTACTGGGATAGCAGCAGCATGTGTCAGTGTCCCTTACAGTACAAAACATACTGCTTCATTCAGCAGTGAATTGAGGGAGAGATTACTCTCCATGGTTCTTATGCAAAGGCTCCTTGACTTTATCATCACTAAGGAAGTTACCAAGCTATCATGGTTTGACAAAAGCACTTTATATGTAAGTGACAAATCCAtcaacatttgtttttaaaagATCAAACATTTTATTTACTAATGTTGTATAATGCTGACTACACTGCCATGAGAAGTCTAAAATGTGTCCGGCAATTCAAAGCAATTGGTCCACCTTTCACAGAGATCCTTTTCGTTTCATGAAAAAGGACAACCTCCACATTGGCTTTTCTCCCCAGTGAGTTTCTTTCCCATCCGTGAGTCCAGAGTTGTAATCTTGGACTCCTCCAGTTAATGCTTTAATCCTAGTCTCTGTACTGTAACCCACTGAACAGCCAGGCTCCTCTCCTACAGGTTAAGACTGTTGGGCCTGCACTCAGAAGTCTTACCTTCCTGTTCTCCACAACTGTAACTGTTAGCTTGTTTTTTAATGCATCTTTGAATTATATGTCATGCAAACAATAAAAATTATGCAAATAAAGCCTTATTTCTGCTGATG
>TU223547
CATTGTTGAAGTGAAAGGAACGTGGACAGCTTGATCCTGCTTGTGGGATGCACTGACAGGGGGGACTAGTGTGAATGGAACGGAGCTGAAAGAAAGTTTCACAGAGCGGCTCAGTGAAAGGCATGTGCAGAATGTGACTGACTGGGCACTAGAAAAGACTGAGCTGTAAGATGAAAGGGATCCCGAGGAACGGTTAGGAGGATGGTTGTGGTGGAAGATAAGAACTGAGGAGAAATCAAGAGAATGGTGTCAAAACAAagTCCTTTGGAAATGGTGGATCTCAAACACAACTAAAGGAAACTGacagagaccactgGTATTCCTGTGAGGCACAGCAGAGCAGGAATACTGGCCAGAGGACACCGGTTAAGCTCAGGTGGTGGGTGCCACAAAATACAGGGGAGAGGAACGCTATTGGTTCCCCACCGTGGAAGAACAGACACCACATTGATACCATAGAGGTGGCAAGTTGCATTTGTGCTGGAGACAGATGGGTCGATAAGGGTACGGTAGTGGTGATAACACCTTTGGGCTGAGCTGCTGTGCCgatgggagaaggaggaggaaggaaacCGAAGTGGGCCTGGAGCCCAATGAGAGACAGGATGGCTGAGCAGAAAGTTAGCCTCCCTGCTAAGCTGATTAATGGGGGCGTGACAGGGCTGGTGGGTGTGAGCTGTGTGTTTCGTAATGATCGGGCCAAGACCCGCCTACAGAACCAGCAGGGTGCCCGAGTCCACACCGGAATgagactgaaaatatttgtcatgggtcccctgatcctcaaaagtttctacagctgcaccattaagagcatcctgaccggttgcatcactgctcgacatctgaccataaggcgctacagagCTGCACTGTTggtcaagggcttGCTGGACTGTTTGACGAAGACAGTAAAGATGGAAGGCTACTTTGGGATATATCGAGGTGCAGTAGTGAATCTCACTCGTCGCACCAGAGAATGCCATTAAACTGTCAGCAAATTATATCTTCAGACAGAAGCTCTCCAAGGACGGGAAACTAACTTTTTGTCCTAGCACAGCACTTACACTTTTAACTATTTAACTGAAACATAAATTGACATACCTTAGAGTAGTTTTTTATCCATCAAGTTAACATAACATTCATGTAATGAAGTCAGACGAACTAAGGTGCTATTGCTACAGTAAACTGTCTCATTTTATCAGGGGTAGTgccattattgttattattgctaTGTGTCTATTTATTAGTCTGTTAACCCTGTCATTTGGCCCACAGGAAGTTGCCCCTGTGGGGGGAGATACTGGCAGGATGCGGTGCGGAGACCTGCCAGATGATAGTGACCACACCCATGGAGATGCTCAAGATCCATTTGCAGGACGCAGGAAGctgaCATAAGCATAGTGGTCCAAGCAGAGTGGTCCAAGCACACACTGCAGCTTCTGGTCCAGCTCCTGGTCCATCTCCTCCAGCCCAGCCTGCCCCTCCACCTCGGACCCCTGCCGTCCGTATTACCCTGGAGCTACTGAAGACACGTGGCCTGCCAGGCCTCTACCGGGGAGCAGGAGCCACACTGATGAGGGATTTTCCTTTCTCTATGATCTACTTCCCGCTGTTCACCAACCTGAACACGCTGGGAAGGGCCGAGTAGTCATGGAGACTTGCAGGAGCGGGCCCCATTCCTGCAGTCCTTCACTGCAGGCTGCACAGCCGGATCAGTGGCAGCTGTAGCTGTCACACCACTTGACgtgtgtgtgtgcagtcataAAGACTCGTATACAGACCTTGCAGAAGGGGGAGGACACATACCGTGGCATTGTTGACTGCACACGGAGGATCTGGAGTAAAGGGCCCAGCAACATTCCTCAATGGGGCAACTAGTCGCGCACTGGTCATCGACCCCCTCTTTGGCATCGCACAGGGGGTCTACTTCCTGGGTGTAGGAGAGCAGTTGCTAGGGCTACTGGGATAGCAGCAGCATGTGTCAGTGTCCCTTACAGTACAAAACATACTGCTTCATTCAGCAGTGAATTGAGGGAGAGATTACTCTCCATGGTTCTTATGCAAAGGCTCCTTGACTTTATCATCACTAAGGAAGTTACCAAGCTATCATGGTTTGACAAAAGCACTTTATATGTAAGTGACAAATCCAtcaacatttgtttttaaaagATCAAACATTTTATTTACTAATGTTGTATAATGCTGACTACACTGCCATGAGAAGTCTAAAATGTGTCCGGCAATTCAAAGCAATTGGTCCACCTTTCACAGAGATCCTTTTCGTTTCATGAAAAAGGACAACCTCCACATTGGCTTTTCTCCCCAGTGAGTTTCTTTCCCATCCGTGAGTCCAGAGTTGTAATCTTGGACTCCTCCAGTTAATGCTTTAATCCTAGTCTCTGTACTGTAACCCACTGAACAGCCAGGCTCCTCTCCTACAGGTTAAGACTGTTGGGCCTGCACTCAGAAGTCTTACCTTCCTGTTCTCCACAACTGTAACTGTTAGCTTGTTTTTTAATGCATCTTTGAATTATATGTCATGCAAACAATAAAAATTATGCAAATAAAGCCTTATTTCTGCTGATG
>TU223549
CATTGTTGAAGTGAAAGGAACGTGGACAGCTTGATCCTGCTTGTGGGATGCACTGACAGGGTCCTTTGGAAATGGTGGATCTCAAACACAACTAAAGGAAACTGacagagaccactgGTATTCCTGTGAGGCACAGCAGAGCAGGAATACTGGCCAGAGGACACCGGTTAAGCTCAGGTGGTGGGTGCCACAAAATACAGGGGAGAGGAACGCTATTGGTTCCCCACCGTGGAAGAACAGACACCACATTGATACCATAGAGGTGGCAAGTTGCATTTGTGCTGGAGACAGATGGGTCGATAAGGGTACGGTAGTGGTGATAACACCTTTGGGCTGAGCTGCTGTGCCgatgggagaaggaggaggaaggaaacCGAAGTGGGCCTGGAGCCCAATGAGAGACAGGATGGCTGAGCAGAAAGTTAGCCTCCCTGCTAAGCTGATTAATGGGGGCGTGACAGGGCTGGTGGGTGTGAGCTGTGTGTTTCGTAATGATCGGGCCAAGACCCGCCTACAGAACCAGCAGGGTGCCCGAGTCCACACCGGAATgagactgaaaatatttgtcatgggtcccctgatcctcaaaagtttctacagctgcaccattaagagcatcctgaccggttgcatcactgctcgacatctgaccataaggcgctacagagCTGCACTGTTggtcaagggcttGCTGGACTGTTTGACGAAGACAGTAAAGATGGAAGGCTACTTTGGGATATATCGAGGTGCAGTAGTGAATCTCACTCGTCGCACCAGAGAATGCCATTAAACTGTCAGCAAATTATATCTTCAGACAGAAGCTCTCCAAGGACGGGAAACTAACTTTTTGTCCTAGCACAGCACTTACACTTTTAACTATTTAACTGAAACATAAATTGACATACCTTAGAGTAGTTTTTTATCCATCAAGTTAACATAACATTCATGTAATGAAGTCAGACGAACTAAGGTGCTATTGCTACAGTAAACTGTCTCATTTTATCAGGGGTAGTgccattattgttattattgctaTGTGTCTATTTATTAGTCTGTTAACCCTGTCATTTGGCCCACAGGAAGTTGCCCCTGTGGGGGGAGATACTGGCAGGATGCGGTGCGGAGACCTGCCAGATGATAGTGACCACACCCATGGAGATGCTCAAGATCCATTTGCAGGACGCAGGAAGctgaCATAAGCATAGTGGTCCAAGCAGAGTGGTCCAAGCACACACTGCAGCTTCTGGTCCAGCTCCTGGTCCATCTCCTCCAGCCCAGCCTGCCCCTCCACCTCGGACCCCTGCCGTCCGTATTACCCTGGAGCTACTGAAGACACGTGGCCTGCCAGGCCTCTACCGGGGAGCAGGAGCCACACTGATGAGGGATTTTCCTTTCTCTATGATCTACTTCCCGCTGTTCACCAACCTGAACACGCTGGGAAGGGCCGAGTAGTCATGGAGACTTGCAGGAGCGGGCCCCATTCCTGCAGTCCTTCACTGCAGGCTGCACAGCCGGATCAGTGGCAGCTGTAGCTGTCACACCACTTGACgtcataAAGACTCGTATACAGACCTTGCAGAAGGGGGAGGACACATACCGTGGCATTGTTGACTGCACACGGAGGATCTGGAGTAAAGGGCCCAGCAACATTCCTCAATGGGGCAACTAGTCGCGCACTGGTCATCGACCCCCTCTTTGGCATCGCACAGGGGGTCTACTTCCTGGGTGTAGGAGAGCAGTTGCTAGGGCTACTGGGATAGCAGCAGCATGTGTCAGTGTCCCTTACAGTACAAAACATACTGCTTCATTCAGCAGTGAATTGAGGGAGAGATTACTCTCCATGGTTCTTATGCAAAGGCTCCTTGACTTTATCATCACTAAGGAAGTTACCAAGCTATCATGGTTTGACAAAAGCACTTTATATGTAAGTGACAAATCCAtcaacatttgtttttaaaagATCAAACATTTTATTTACTAATGTTGTATAATGCTGACTACACTGCCATGAGAAGTCTAAAATGTGTCCGGCAATTCAAAGCAATTGGTCCACCTTTCACAGAGATCCTTTTCGTTTCATGAAAAAGGACAACCTCCACATTGGCTTTTCTCCCCAGTGAGTTTCTTTCCCATCCGTGAGTCCAGAGTTGTAATCTTGGACTCCTCCAGTTAATGCTTTAATCCTAGTCTCTGTACTGTAACCCACTGAACAGCCAGGCTCCTCTCCTACAGGTTAAGACTGTTGGGCCTGCACTCAGAAGTCTTACCTTCCTGTTCTCCACAACTGTAACTGTTAGCTTGTTTTTTAATGCATCTTTGAATTATATGTCATGCAAACAATAAAAATTATGCAAATAAAGCCTTATTTCTGCTGATG

Function

symbol description
slc25a18 Predicted to enable L-aspartate transmembrane transporter activity and L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A18 (solute carrier family 25 member 18).

NR:

description
mitochondrial glutamate carrier 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223543 False 2027 lncRNA 0.43 9 85831239 85836687
TU223542 False 2928 TUCP 0.41 12 85836299 85843493
TU223547 False 2589 TUCP 0.48 13 85836299 85843493
TU223549 True 2377 TUCP 0.48 12 85836299 85843493

Neighbor

gene id symbol gene type direction distance location
LOC110502245 NA coding downstream 26886 85803678 ~ 85804353 (-)
bcl2l13 LOC106561371 coding downstream 28287 85766088 ~ 85802952 (-)
dennd11 kiaa1147 coding downstream 82840 85734259 ~ 85748399 (-)
LOC110502240 nup205 coding downstream 104761 85711539 ~ 85726478 (-)
LOC118936851 NA coding downstream 131441 85697420 ~ 85699798 (-)
LOC110498203 NA coding upstream 3487 85840174 ~ 85844254 (-)
ribc2 LOC106561368 coding upstream 78624 85915311 ~ 85920584 (-)
LOC110498224 LOC106561365 coding upstream 84167 85920854 ~ 85926832 (-)
LOC110498255 LOC106561363 coding upstream 105810 85942497 ~ 85948458 (-)
LOC110498273 LOC106561367 coding upstream 112085 85948772 ~ 85952899 (-)
G197441 NA non-coding downstream 77021 85752441 ~ 85754218 (-)
G197424 NA non-coding downstream 85835 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 146713 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 347614 85483027 ~ 85483625 (-)
G196784 NA non-coding downstream 379156 85451850 ~ 85452083 (-)
G197552 LOC106561360 non-coding upstream 190203 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 237586 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 272376 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 273165 86109852 ~ 86110146 (-)
G197638 NA non-coding upstream 273461 86110148 ~ 86110650 (-)
LOC110498022 LOC106561385 other downstream 1191483 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1849072 83977965 ~ 83982167 (-)
G195427 NA other downstream 1926788 83881540 ~ 83904451 (-)
G194491 NA other downstream 2215205 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2608095 83219964 ~ 83223972 (-)
G197554 NA other upstream 123158 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1066349 86903036 ~ 86903956 (-)
G198912 NA other upstream 1485452 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3770150 89606837 ~ 89609890 (-)
G202279 NA other upstream 4540870 90377557 ~ 90441425 (-)
dyrk4 LOC106561362 coding upstream 112015 85955508 ~ 85974164 (-)

Expression


Co-expression Network