Gene
RNA
| Item | Value |
|---|---|
| gene id | G197036 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 85958166 ~ 85961475 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223027 | False | 328 | lncRNA | 0.57 | 3 | 85958166 | 85958565 |
| TU223028 | True | 318 | lncRNA | 0.43 | 3 | 85958166 | 85961475 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498230 | cecr1 | coding | upstream | 42708 | 85908697 ~ 85915458 (+) |
| LOC110498211 | LOC106561369 | coding | upstream | 57272 | 85845868 ~ 85900894 (+) |
| LOC110498193 | LOC106561370 | coding | upstream | 122051 | 85831193 ~ 85836115 (+) |
| bida | LOC106561376 | coding | upstream | 193135 | 85755625 ~ 85765031 (+) |
| wee2 | LOC106561372 | coding | upstream | 203955 | 85748761 ~ 85754211 (+) |
| LOC110498298 | LOC106561360 | coding | downstream | 55412 | 86016887 ~ 86036771 (+) |
| LOC110498335 | LOC106561359 | coding | downstream | 81325 | 86042800 ~ 86111227 (+) |
| LOC110498346 | LOC106573196 | coding | downstream | 153150 | 86114625 ~ 86121138 (+) |
| LOC110498357 | LOC106561358 | coding | downstream | 163283 | 86124758 ~ 86131467 (+) |
| LOC110498407 | LOC106561353 | coding | downstream | 462235 | 86423710 ~ 86477838 (+) |
| G197031 | LOC106561367 | non-coding | upstream | 7222 | 85950419 ~ 85950944 (+) |
| G196990 | NA | non-coding | upstream | 114907 | 85842017 ~ 85843259 (+) |
| G196905 | NA | non-coding | upstream | 180228 | 85775488 ~ 85777938 (+) |
| G196877 | NA | non-coding | upstream | 354676 | 85602573 ~ 85603490 (+) |
| G196816 | NA | non-coding | upstream | 455942 | 85501891 ~ 85502224 (+) |
| G197043 | NA | non-coding | downstream | 7338 | 85968813 ~ 85969223 (+) |
| G197116 | NA | non-coding | downstream | 111050 | 86072525 ~ 86073581 (+) |
| G197129 | NA | non-coding | downstream | 128467 | 86089942 ~ 86090821 (+) |
| G197072 | NA | non-coding | downstream | 151525 | 86113000 ~ 86113167 (+) |
| LOC110498034 | LOC106573178 | other | upstream | 938132 | 85010068 ~ 85054392 (+) |
| G195155 | NA | other | upstream | 1357842 | 84596410 ~ 84600324 (+) |
| G194395 | NA | other | upstream | 2398568 | 83558920 ~ 83559598 (+) |
| LOC110497837 | tmem263 | other | upstream | 2833201 | 83119221 ~ 83124965 (+) |
| G193339 | LOC106561425 | other | upstream | 3303736 | 82652633 ~ 82654430 (+) |
| G197069 | NA | other | downstream | 174141 | 86135616 ~ 86136608 (+) |
| G198417 | LOC106561459 | other | downstream | 1076036 | 87037511 ~ 87039236 (+) |
| G198575 | NA | other | downstream | 1188727 | 87150202 ~ 87150490 (+) |
| G198784 | NA | other | downstream | 1532148 | 87493623 ~ 87496735 (+) |
| G198811 | LOC106561481 | other | downstream | 1574461 | 87535936 ~ 87536928 (+) |
