Gene
RNA
| Item | Value |
|---|---|
| gene id | G197636 |
| gene name | LOC106561359 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 86109063 ~ 86109468 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| solute carrier family 45 member 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223706 | True | 406 | lncRNA | 0.55 | 1 | 86109063 | 86109468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498321 | LOC106561361 | coding | downstream | 91499 | 86012158 ~ 86017564 (-) |
| dyrk4 | LOC106561362 | coding | downstream | 134899 | 85955508 ~ 85974164 (-) |
| LOC110498273 | LOC106561367 | coding | downstream | 156164 | 85948772 ~ 85952899 (-) |
| LOC110498255 | LOC106561363 | coding | downstream | 160605 | 85942497 ~ 85948458 (-) |
| LOC110498224 | LOC106561365 | coding | downstream | 182231 | 85920854 ~ 85926832 (-) |
| tigara | LOC106561357 | coding | upstream | 27223 | 86134395 ~ 86139827 (-) |
| ccnd2a | LOC106561356 | coding | upstream | 32253 | 86141721 ~ 86420584 (-) |
| LOC118936857 | NA | coding | upstream | 291901 | 86401369 ~ 86404155 (-) |
| setd6 | setd6 | coding | upstream | 410554 | 86520022 ~ 86526770 (-) |
| LOC110498617 | LOC106561447 | coding | upstream | 548546 | 86658014 ~ 86676250 (-) |
| G197613 | NA | non-coding | downstream | 34224 | 86074273 ~ 86074839 (-) |
| G197552 | LOC106561360 | non-coding | downstream | 65758 | 86026890 ~ 86043305 (-) |
| G197498 | slc25a18 | non-coding | downstream | 272376 | 85831239 ~ 85843493 (-) |
| G197441 | NA | non-coding | downstream | 354845 | 85752441 ~ 85754218 (-) |
| G197424 | NA | non-coding | downstream | 363659 | 85664173 ~ 85745404 (-) |
| G197637 | NA | non-coding | upstream | 384 | 86109852 ~ 86110146 (-) |
| G197638 | NA | non-coding | upstream | 680 | 86110148 ~ 86110650 (-) |
| G197639 | NA | non-coding | upstream | 1405 | 86110873 ~ 86111077 (-) |
| G197645 | NA | non-coding | upstream | 11020 | 86120488 ~ 86124270 (-) |
| G197652 | NA | non-coding | upstream | 23737 | 86133205 ~ 86133640 (-) |
| G197554 | NA | other | downstream | 145398 | 85959845 ~ 85963665 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 1469307 | 84596433 ~ 84910878 (-) |
| G195486 | LOC106573171 | other | downstream | 2126896 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 2204612 | 83881540 ~ 83904451 (-) |
| G198342 | LOC100194703 | other | upstream | 793568 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 1212671 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 3497369 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 4268089 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 5479744 | 91589212 ~ 91591049 (-) |
