G197171


Basic Information

Item Value
gene id G197171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86187091 ~ 86187440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223182
gtgacatcagttatgttgtgacaaggtaggggtggtatgcagatgatagccctatttagtaaaagaccaagtccatactatggcaagaacagctcaaataagcaaagagaaatgatagtccatcattactttaagacatgaaggtcagtcaatacggaaaatttcaagaactttgaaagtttcttcaagtgcagtcgcaaaaaccaagtgctatgatgaaactggctctcacgaggaccgccacaggaaaggaagatgcagaggataagttcattagagttatgtcatgacgtggccctctttgggtacagcgagcaccatccccctctctctcaccacctctctcttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223182 True 350 lncRNA 0.45 1 86187091 86187440

Neighbor

gene id symbol gene type direction distance location
LOC110498357 LOC106561358 coding upstream 55624 86124758 ~ 86131467 (+)
LOC110498346 LOC106573196 coding upstream 65953 86114625 ~ 86121138 (+)
LOC110498335 LOC106561359 coding upstream 75864 86042800 ~ 86111227 (+)
LOC110498298 LOC106561360 coding upstream 150320 86016887 ~ 86036771 (+)
LOC110498230 cecr1 coding upstream 271633 85908697 ~ 85915458 (+)
LOC110498407 LOC106561353 coding downstream 236270 86423710 ~ 86477838 (+)
LOC110498438 LOC106561350 coding downstream 293835 86481275 ~ 86520602 (+)
LOC110498585 LOC106561449 coding downstream 368035 86555475 ~ 86564249 (+)
LOC110498595 LOC106561448 coding downstream 386129 86573569 ~ 86624542 (+)
trnag-gcc-2 NA coding downstream 532176 86719616 ~ 86719686 (+)
G197170 NA non-coding upstream 357 86186396 ~ 86186734 (+)
G197156 NA non-coding upstream 5603 86165209 ~ 86181488 (+)
G197066 NA non-coding upstream 13180 86167953 ~ 86173911 (+)
G197065 NA non-coding upstream 40866 86141460 ~ 86146225 (+)
G197070 NA non-coding upstream 51664 86135101 ~ 86135427 (+)
G197180 NA non-coding downstream 18612 86206052 ~ 86206368 (+)
G197183 NA non-coding downstream 21853 86209293 ~ 86210452 (+)
G197190 NA non-coding downstream 32819 86220259 ~ 86220464 (+)
G197200 NA non-coding downstream 60206 86247646 ~ 86248186 (+)
G197206 NA non-coding downstream 69126 86256566 ~ 86256944 (+)
G197069 NA other upstream 50483 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1167057 85010068 ~ 85054392 (+)
G195155 NA other upstream 1586767 84596410 ~ 84600324 (+)
G194395 NA other upstream 2627493 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3062126 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 850071 87037511 ~ 87039236 (+)
G198575 NA other downstream 962762 87150202 ~ 87150490 (+)
G198784 NA other downstream 1306183 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 1348496 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 1679437 87866877 ~ 87867967 (+)

Expression


Co-expression Network