G197746


Basic Information

Item Value
gene id G197746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86270818 ~ 86272063 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223826
CTGCCATAAACCGTCACATTGACTACTGCCACACTGTTTCCTCCgccataacccctcacattgactactgcaacaccattccccctgccataaaccctcacattgactactgcaacaccattccccctgccataacccctcacattgactactgcaacaccattccccctgccataaaccctcacattgactactgcaacaccattccccctgccataacccctcacattgactactgcaacactatttcccctgccataacccctcacattgactactgcaacactatttcccctgccataacccctcacattgactactgcaacactatttcccctgccataaccactcacattgactactgcaacactatttcccctgccataacccctcacattgactactgcaacactatttCCCCTGCCATTACCCCTCACTTTTACTACTGCAACACCAttccccctgccataacccctcacattgactactgcaacactatttcccctgccataaccactcacattgactactgcaacactatttcccctgccataaccacTCACATTGACTACTGCCACACTGTTTCCcctgccataaccactcacattgactactgcaacactatttcccctgccataacccctcacattgactactgcaacactatttCCCCTGCCATTACCCCTCAcattgactactg

Function

NR:

description
ribosomally synthesized cyclic peptide ustiloxin B precursosr-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223826 True 700 lncRNA 0.49 3 86270818 86272063

Neighbor

gene id symbol gene type direction distance location
tigara LOC106561357 coding downstream 130991 86134395 ~ 86139827 (-)
LOC110498321 LOC106561361 coding downstream 253254 86012158 ~ 86017564 (-)
dyrk4 LOC106561362 coding downstream 296654 85955508 ~ 85974164 (-)
LOC110498273 LOC106561367 coding downstream 317919 85948772 ~ 85952899 (-)
LOC110498255 LOC106561363 coding downstream 322360 85942497 ~ 85948458 (-)
LOC118936857 NA coding upstream 129306 86401369 ~ 86404155 (-)
setd6 setd6 coding upstream 247959 86520022 ~ 86526770 (-)
LOC110498617 LOC106561447 coding upstream 385951 86658014 ~ 86676250 (-)
LOC118937297 LOC106561464 coding upstream 412024 86684087 ~ 86695202 (-)
LOC118942936 LOC106611498 coding upstream 427278 86699341 ~ 86701251 (-)
G197739 NA non-coding downstream 11415 86258870 ~ 86259403 (-)
G197735 NA non-coding downstream 20426 86250135 ~ 86250392 (-)
G197733 NA non-coding downstream 25567 86244808 ~ 86245251 (-)
G197732 NA non-coding downstream 26136 86244259 ~ 86244682 (-)
G197719 NA non-coding downstream 58024 86212561 ~ 86212794 (-)
G197765 NA non-coding upstream 43941 86316004 ~ 86316440 (-)
G197768 NA non-coding upstream 75829 86347892 ~ 86354984 (-)
G197660 NA non-coding upstream 85629 86357692 ~ 86360691 (-)
G197655 NA non-coding upstream 140601 86412664 ~ 86458968 (-)
G197808 NA non-coding upstream 211618 86483681 ~ 86483970 (-)
G197554 NA other downstream 307153 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 427325 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 1631062 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 2288651 83977965 ~ 83982167 (-)
G195427 NA other downstream 2366367 83881540 ~ 83904451 (-)
G198342 LOC100194703 other upstream 630973 86903036 ~ 86903956 (-)
G198912 NA other upstream 1050076 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3334774 89606837 ~ 89609890 (-)
G202279 NA other upstream 4105494 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 5317149 91589212 ~ 91591049 (-)

Expression


Co-expression Network