G197768


Basic Information

Item Value
gene id G197768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86347892 ~ 86354984 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223852
acctatgatgaaaattacaggcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatactttttttgccccactgtaaatgtacAAACTGATCTTCAcaatactgtactgtgtgtaaaTTATGCTTTATTCTTACTTGGTATTTAGTTTTCTGTCCTTCTCACATAACACAAAGACCGATAGAAATGTAACTGGTGCATTTTAGGGTGCTTTAAGACTTTGTTGCAGTCACACCTTATTTTCTGAGATTTCTTCATTTTCTCATGTGTTTGCTTTTCTCTCATGTGGCATGAGACAAACGGTACGCCTTGAAAAGCACCTATCGGCTTTGACTTAGGTGTATACACATTTTGTGTTTATATCCTATGATGGTTTGCTTTTGTTCTTATTTTGGGCTGTGGCCTTACAATAATTTCTTAGAATTTCACTTGACTTTCCGTAAGCATCATCCTCTGTATGAAAGTTATATCAGTGGCTTTGACTTAACTCTTGGTTTGACTTACCCTTGTCTCAGCTTATGTGATAATGCTCTTGCTTTATCCTGTCATAAATGTATTTTAGACATTCAATAACCTCACATGTATTGTAGGATAAGAGCTCAGCCATGTTAATTGTTTCAGGAGTTTGACAAAAGCACTTTTGAGTTTGAACACTTACAGCACATTACAGAAGAACAAGAAGTCCAGACTAACCTGTACTCCCTCCCAGACGTCTGCCTATACAGTGTAAGCATTGGGTTATGGGGTGAGGAAAGGGCCCTGTTACAAGCTGCAGCACGGCCTGTGTACACTCCTGCTCTGGCATGCAACAAAGTATGTGCCAGTTCCTATGACTCGCTCACTATGCCATGACACTTTTAGTTATCCCCCCCAACAAATGTCACTCACATTGAAAAGCTGCATTCATACAGGAATTCATTTAAAGTGTATTTGATGTGTCCATGTGACGTTAATGTCATAAAGCAGTAACATAGACTTACTAATAGAATATTTCATATTCATGTAATTTCTTCCCCATTTACCTTTTTAATGATTTGATGGTCTAGCAACATGGCATGATCTTATTGTAAGGTTGACCAGTTATTTACAGTACAAGTAAAAAGTGtggacaccttctcattcaagcgttttgctttatttttactattttctacattttagaataatagtgaatacatcaaaactatgaaaaaacacatggaatcatgtagtaaccacaaaagtgttaacaaatcaaaatatattttagattcttcaaagtagccggcCTTTGCctttaatgacagctttgcacagtcttggcattctctcaaccagcttcataaggtagtcacttggaatgcttttcaaacagccTTGAAtgggttcccacatatgctgagcacttgttggctgcttatccttcactctgcggtccaacttgtcacatctgctcctgccacacccCTAGTGGACATccggtgtctccttgacctgcagccattccctctccctctccctttgtgtgtgattgtgtgattggggacaggtgtgctggagtcagaaaagttccccaccagctgcaatccgttccataatcaagacctctacaagtGCAGTTAATTGCAGATTTCTGAGGcaagtaactctaatgaacttatcctctgcagcagaaaactctggttcttcctttcttgtggcagtccagtttcatcatagcaaattatgttttttgcgactgcacatgaggaaactttcaaagttgacattttctgtattgactgaccttcaccttcacgtcttaaagtaatcATGGACTATATTTTctcattgcttatttgagctgttcttgccattaatatggacttggtattttaccaaatcttctgtataccaaccctaccttgtcacaacacaactcattGGTTCAAATGCATaaataaggaaagaaattccacaaattgacttttaacaaggcacacctgttaattgaaatgcatcccAGGTGACTAcagtacctcatgaagctggttgagagaatgccaagagtgtgcatcaaggcaaagggtggctactttgaagaatctcaaatataaaatatatttggatttgtttgacacttttttggttactacgtgattccatatgtgttatttcatagtttgatgtcttcactattaatctacaatgtagaaaatagtaaaaataaagaaaaaccttgtaatgagtaggtgtgtccaatcttttgactggtactgtatgtatggactGTGTGACAGCCTGCACTGGGGAATGGCAGTCCCCTTGATCACAGTCTCATGACTTATCGAACGAATGCTATTTCCAAATTATAGCCTGAAGGATAAACGGAGGCGTGAGACACGTAAGAATAGTGTGTACTCGATTAATAGTTATTCACTGGAACTGTATTTGTTTCCTCCAAAGGTCAGGGCCCATTGCCAAAACGTTGCTGTGTTAAGACAAGAGCCAGCATTTACAATGGAATTTGCCACCACATTATTTGCCAATGGTTGCTTGTGTTGACAAGTGACAAATGCATTGATACTTTGATCAATCTTATCAAACTGCCGGCAGTTAAGCACGAGAAGCTGGAGCATCCCCTTGGAATGGGTGCATTAAATGTCAACCTTGTCTGACTTGGTCAGAAGTTCGGCCATTCCACATTCCTGACTAAGGGATAAAGCTGCTCTAATCCCTTTTACCAGGTAGCCAGAGTTGGCAGCCGAGCCTGGAATTCCAGTGGCATTCCAATTTGGGGAAGTTGCTAGGGTCTGGATGGACAATTCCCACAACAAAGGAAGACTCTCATTCAAAGAAAATAGGGTTTAAGTTCTGTGAGAAAGTCAGCCGAAAGTCATGTGAATAGTGGCATATTTAGAGAGCTTTTGATTCGGCGGCTGCTCTAAAAAGGGCTGAGGCAATTGGACGTCCACAAGCCGGGAGGCTGATGCAAAGTGGAAGGTGGGAGGCCGGTCTTGATCTCATGACAAGTCTGGCTGAAGGGTGACAGTCCAGAGCAGATTGCAGCAGGCTTACCTGTCAAAGCCAAGCCAATGAGCTGCAGTCCTGCAGTACAGCCCCAACAGTACTGACTTCAGAGTCACAGAGAGCACAGTCTGGCATTTTATCTGTCTGGAGAATGCTGTATGGTGCTGCTAAAGACCACAGGCTCCATAGAAGTACAGGGGCATTACTGATCTGTCTCACTGAGTCCTCATAGCCCAGTGGCGTCGGTGTGAAAAACAtggagatatacactgagtgtacaaaacattagaaacatgtggaacgctttcgacagcTCGTAGatcatgccccaacaaattgtaTGTTTTGTACATTGGCCGCTCTTTGTCCTGTCTGAGTAGCATTGAGACTGAATAAGACTCCATGCAACCTGAACAAAAGCCATTAATCTGGAGTACTGTACACGCAAACATGAATTCTTTCAGTTCAATAAAACTCTGTTAAGGAAGAATGGGTCTATTTCACTGGGTCCCAATCCCTAAGTTTATCGGGGagatctaattagcataatgtcTGCTTACTGCTGGCCAGACGTTACTTTTTCAGTGATATACAAATAATGTTTGTGTTATAGCCTAAGTATGTCACAACCTGAGTTTTTTGTTGTCAGAATGGTCTCTCTGCTTGGATGATTGAAAAAGTTGATATGGTCTGTATGTATGGCCTAGTCAGTATGACGGAGGGTGTTCACATGGTAATGTATATCATGTTTTCCATATCAAATGGGTGGTCGTCATACACTCCCAAATCTACATATCAAACCAAGATTTTAAGACCCATTAGTTTATGATTTATCCCTCTCTGTCTATGCAAACACAGTATATTCTAACTCCCACTTATATTAAATAATGTGAAGAATTTGTCACATTATAGTATAATTGTAACGTGtgcgctgggagtcgggaagcaagttcagggagtgagtacataatgaatgaacaaaacataacacaaaacaagaaacacgaacaacgcacagacatgaaactgaaacaaacaacgcctggggaaggaaccaaaggcagtgacatatatagggaaggtaatcagggaagtgatggagtccaggtgagtctgttGACACGCAGGTGAGCGTAATGATAACAATAATTAATCTagaatatttttttgtattttatctatttttttctcccaatttcaattatgatcttgtctcatcgctgcaactccccaacaagCTGGGGAGAACCGTGTTCCTTAATAAACAACCGCCCCCTTAAACCGGAAGCCAGCTGGACCAATGTGGTGGAGGAAACACCGCTATTAACctcctgtatgtgtgtatgtgtgcgtgcatgtgtgtgtgtagttaaacGTTCAGTCAAGTTAGAAGACAAGGGCTCtgggcctggggggggggggggggggggggggggtctggtttTTGAGATGGTGAGAAGGGCATGTCAGCCTCTATTGGCTCCCTGCTGTTAGTGTTGTACTTGAATCAGTCACAGAGTCCCACAGTaaaaatgaacagccacacagacagactgcaGATTCACCAGGCAGAGCAGGAccctctctgtcattctccctgAACTCCAGACACTACAAGGCgtccctgtttctttgtgtggCGTCTGTGAAGAGGCGTGTTTATAGACACAGAACATAAATCAGCCATGTGTTAAGGCCAGTGTTGAAAAGTTACACATATGTGAAAGATGCTCTGTGTTGTAATGGCAGTACAttcaaaacacacacaagcatgcacgcacgcacacacacatacattcatagAGACACATTGACAAACAGACACACGTGAATAGTAACTACCACATTCTCCCACTGTAAGATAGATTTTCCACACCACAGATGGTGCTCGCTGCTTTAACTAGATTCATCCTCAGTTGTTTCTGAATGTGACGGTGGGTTTTCTATGTGTAAGTTGCTCTTTGACAAGAGGCTCTTCTTATGTAATGCTTTCGAGTGCCTGCCCTTGTCTTTTAGCTGTACCCATAATTAGCACACAATAGGCCTATATCTCACATACCTGTTCGGCCCGTCACCCCCAAAAGGGAGACAGTGTCCCCTGACTGATGGCTAGAAGTGGGACAAGAAAACAGGAGCCACCGTTCCCTGATGTCACTGAGGAAGAATCTATCTTCCCCTTCACATAATCAACCAGCTGTGTCCGACTCGTCCAGCATGTCACCTATTTTACAATCCATCCCACACTGGGTCTACTCTCCCCTGGTTCCCACAGAGCCACGGTAACACTGCCCAGAGAAAAGGTGCCCATTTCCAGCGTTCCCAACCAGCTCACTGTTTCACCGCCTGGAAATCCCCCTCCGCACAAAGAGACACAAATATAATACTGCACCACTGCAGGCGGGGGAGGTATTCAGGGGCTATTCACAGGACAATATTGATACGGGAGGCACTTTTGTCTGTGAATCCTTCTGGGAATGCACTCAGTTGTTGTGGCTATATGGACCCGCATTCTATCCAAGTGCaacaggtagctagctaggtgTTACTTGTTATTGATTCAAGATAAGCGGAACACTTACGGACACTCCGTtttctttcttttcctttttccGTAGTTTTTTCTGGGAACCTCACATGTGAGAAGCTGATCTGTCAGCTGATGTTAGCTGATCTGTCAGCTGATGTCAGCTGATCTGTCAGCTGATGTTAGCTGATCATGTGTTTTCAGCCTGCATATTCAAATCCCACCGATTTGGACATTGTCTGCAGGAAGTGTTGTACAGTATAGGCCAGTAGTCTGTGTTACCTGACTGTTTCTGTATTCAACAATGGTACAGGGCAATTTCATGATaacagaattaggctgatactcagatttttcactttaaaaccataaaactctatgcacaaggactaatTTTAACAATATAGACAGaacatttgacaaaaacacatttacttgaagaacagtgcagatgcaaagtttggtaacagaatgacggtttGTGCTGTTGGTGccgtaaatgtgtttttgtacaattttctgtgtaaattgttaaacgtagtccttgtgcatagagttgtatggtttgttaaactttgaaatcaatgaatTTTGTGTGACATATATTTAAAATTGAAAACTCCATATGTACTGGCTCACCTCTCCTTACCACATCATATTTCCAGCCCCATGAATGAGGCCCTCAAGCAGGAACTGACAGTAACACAGAGCCAGACAGCTCTAACAAATGTCTATACCAAGAATATGCAACTCTGATGGGGGAGGGGCCACAAAAAATCGGAACTCCTCATGGGATGCTGCAGTGGCTCACCGGTCTGCATCCATACCTACACATGTAGTCAGGCCCTAGCCTTTTGATGGCCCGAAGCAAAATTTTGATTCCCCCACCTTGCGACCAAAATATTTTAGTGGCCCCCCCCTtgacagaggagaaaacagatgTGCGTTATaagagttaatttcctgcaattctataaaTTTttccatggggcatagagaacattttgcagttttaaagcaagtttgctgcaaatctacacattttgccatggggtggagataaGATTTTGCAATATTATGaatcatttcatgcaattctattaattttgccatggggtggagagaaatgtttacagtttttaatatgatatccgAGAGTGACTAACAATTCAATGGGGCTCCCCTCGGACAATGAtgactacaagtttagatagctagcCGCTAGACTTATTCAAtgtaacaagagaaaaactgctgatgcacatcCAAAtggaaattgcaccttgtgtattgtACTATTCTAACGCTCAACAGTAAGTTGATACCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223852 True 6852 lncRNA 0.42 3 86347892 86354984

Neighbor

gene id symbol gene type direction distance location
tigara LOC106561357 coding downstream 208065 86134395 ~ 86139827 (-)
LOC110498321 LOC106561361 coding downstream 330328 86012158 ~ 86017564 (-)
dyrk4 LOC106561362 coding downstream 373728 85955508 ~ 85974164 (-)
LOC110498273 LOC106561367 coding downstream 394993 85948772 ~ 85952899 (-)
LOC110498255 LOC106561363 coding downstream 399434 85942497 ~ 85948458 (-)
LOC118936857 NA coding upstream 46385 86401369 ~ 86404155 (-)
setd6 setd6 coding upstream 165038 86520022 ~ 86526770 (-)
LOC110498617 LOC106561447 coding upstream 303030 86658014 ~ 86676250 (-)
LOC118937297 LOC106561464 coding upstream 329103 86684087 ~ 86695202 (-)
LOC118942936 LOC106611498 coding upstream 344357 86699341 ~ 86701251 (-)
G197765 NA non-coding downstream 31452 86316004 ~ 86316440 (-)
G197746 NA non-coding downstream 75829 86270818 ~ 86272063 (-)
G197739 NA non-coding downstream 88489 86258870 ~ 86259403 (-)
G197735 NA non-coding downstream 97500 86250135 ~ 86250392 (-)
G197733 NA non-coding downstream 102641 86244808 ~ 86245251 (-)
G197660 NA non-coding upstream 2708 86357692 ~ 86360691 (-)
G197655 NA non-coding upstream 57680 86412664 ~ 86458968 (-)
G197808 NA non-coding upstream 128697 86483681 ~ 86483970 (-)
G197824 NA non-coding upstream 149508 86504492 ~ 86504969 (-)
G197835 NA non-coding upstream 175558 86530542 ~ 86530878 (-)
G197554 NA other downstream 384227 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 504399 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 1708136 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 2365725 83977965 ~ 83982167 (-)
G195427 NA other downstream 2443441 83881540 ~ 83904451 (-)
G198342 LOC100194703 other upstream 548052 86903036 ~ 86903956 (-)
G198912 NA other upstream 967155 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3251853 89606837 ~ 89609890 (-)
G202279 NA other upstream 4022573 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 5234228 91589212 ~ 91591049 (-)

Expression


Co-expression Network