Gene
RNA
| Item | Value |
|---|---|
| gene id | G197808 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 86483681 ~ 86483970 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223904 | True | 290 | lncRNA | 0.33 | 1 | 86483681 | 86483970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccnd2a | LOC106561356 | coding | downstream | 63097 | 86141721 ~ 86420584 (-) |
| LOC118936857 | NA | coding | downstream | 79526 | 86401369 ~ 86404155 (-) |
| tigara | LOC106561357 | coding | downstream | 343854 | 86134395 ~ 86139827 (-) |
| LOC110498321 | LOC106561361 | coding | downstream | 466117 | 86012158 ~ 86017564 (-) |
| dyrk4 | LOC106561362 | coding | downstream | 509517 | 85955508 ~ 85974164 (-) |
| setd6 | setd6 | coding | upstream | 36052 | 86520022 ~ 86526770 (-) |
| LOC110498617 | LOC106561447 | coding | upstream | 174044 | 86658014 ~ 86676250 (-) |
| LOC118937297 | LOC106561464 | coding | upstream | 200117 | 86684087 ~ 86695202 (-) |
| LOC118942936 | LOC106611498 | coding | upstream | 215371 | 86699341 ~ 86701251 (-) |
| LOC110498636 | LOC106561446 | coding | upstream | 223506 | 86707476 ~ 86714996 (-) |
| G197655 | NA | non-coding | downstream | 24713 | 86412664 ~ 86458968 (-) |
| G197660 | NA | non-coding | downstream | 122990 | 86357692 ~ 86360691 (-) |
| G197768 | NA | non-coding | downstream | 128697 | 86347892 ~ 86354984 (-) |
| G197765 | NA | non-coding | downstream | 167241 | 86316004 ~ 86316440 (-) |
| G197746 | NA | non-coding | downstream | 211618 | 86270818 ~ 86272063 (-) |
| G197824 | NA | non-coding | upstream | 20522 | 86504492 ~ 86504969 (-) |
| G197835 | NA | non-coding | upstream | 46572 | 86530542 ~ 86530878 (-) |
| G197836 | LOC100380853 | non-coding | upstream | 49989 | 86533959 ~ 86534243 (-) |
| G197837 | NA | non-coding | upstream | 50391 | 86534361 ~ 86534589 (-) |
| G197844 | NA | non-coding | upstream | 67468 | 86551438 ~ 86551751 (-) |
| G197554 | NA | other | downstream | 520016 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 640188 | 85831239 ~ 85843493 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 1843925 | 84596433 ~ 84910878 (-) |
| G195486 | LOC106573171 | other | downstream | 2501514 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 2579230 | 83881540 ~ 83904451 (-) |
| G198342 | LOC100194703 | other | upstream | 419066 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 838169 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 3122867 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 3893587 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 5105242 | 91589212 ~ 91591049 (-) |
