Gene
RNA
| Item | Value |
|---|---|
| gene id | G197836 |
| gene name | LOC100380853 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 86533959 ~ 86534243 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223932 | True | 285 | lncRNA | 0.36 | 1 | 86533959 | 86534243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| setd6 | setd6 | coding | downstream | 7189 | 86520022 ~ 86526770 (-) |
| ccnd2a | LOC106561356 | coding | downstream | 113375 | 86141721 ~ 86420584 (-) |
| LOC118936857 | NA | coding | downstream | 129804 | 86401369 ~ 86404155 (-) |
| tigara | LOC106561357 | coding | downstream | 394132 | 86134395 ~ 86139827 (-) |
| LOC110498321 | LOC106561361 | coding | downstream | 516395 | 86012158 ~ 86017564 (-) |
| LOC110498617 | LOC106561447 | coding | upstream | 123771 | 86658014 ~ 86676250 (-) |
| LOC118937297 | LOC106561464 | coding | upstream | 149844 | 86684087 ~ 86695202 (-) |
| LOC118942936 | LOC106611498 | coding | upstream | 165098 | 86699341 ~ 86701251 (-) |
| LOC110498636 | LOC106561446 | coding | upstream | 173233 | 86707476 ~ 86714996 (-) |
| zpd | LOC106594968 | coding | upstream | 180817 | 86715060 ~ 86719172 (-) |
| G197835 | NA | non-coding | downstream | 3081 | 86530542 ~ 86530878 (-) |
| G197824 | NA | non-coding | downstream | 28990 | 86504492 ~ 86504969 (-) |
| G197808 | NA | non-coding | downstream | 49989 | 86483681 ~ 86483970 (-) |
| G197655 | NA | non-coding | downstream | 74991 | 86412664 ~ 86458968 (-) |
| G197660 | NA | non-coding | downstream | 173268 | 86357692 ~ 86360691 (-) |
| G197837 | NA | non-coding | upstream | 118 | 86534361 ~ 86534589 (-) |
| G197844 | NA | non-coding | upstream | 17195 | 86551438 ~ 86551751 (-) |
| G197864 | NA | non-coding | upstream | 36458 | 86570701 ~ 86571080 (-) |
| G197974 | NA | non-coding | upstream | 73688 | 86607931 ~ 86611264 (-) |
| G198005 | NA | non-coding | upstream | 113438 | 86647681 ~ 86647988 (-) |
| G197554 | NA | other | downstream | 570294 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 690466 | 85831239 ~ 85843493 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 1894203 | 84596433 ~ 84910878 (-) |
| G195486 | LOC106573171 | other | downstream | 2551792 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 2629508 | 83881540 ~ 83904451 (-) |
| G198342 | LOC100194703 | other | upstream | 368793 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 787896 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 3072594 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 3843314 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 5054969 | 91589212 ~ 91591049 (-) |
