G197314


Basic Information

Item Value
gene id G197314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86550468 ~ 86550873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223339
cctgttgcaccctcgacaaccactgtgattattattatttgaccctcctggtcatctatgaacatttgaacatcttggccatgttctgttatattctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttctggcttttctagggagtttttcctagccactgtgcttctacacctgcattgcttgctgtttggggttttaggatgggtttctgtacaacactttgtgacatcagctgatgtaagaagggctctataaatacatttgattgatgttGGCGACAAAAAAAGTGCTAAAATCAAAAGGGATTATCAACATTGCCTGACACCTTTGTTCTTGCAAAATAATCTACAACAACTGTAGAAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223339 True 406 lncRNA 0.43 1 86550468 86550873

Neighbor

gene id symbol gene type direction distance location
LOC110498438 LOC106561350 coding upstream 29866 86481275 ~ 86520602 (+)
LOC110498407 LOC106561353 coding upstream 72630 86423710 ~ 86477838 (+)
LOC110498357 LOC106561358 coding upstream 419001 86124758 ~ 86131467 (+)
LOC110498346 LOC106573196 coding upstream 429330 86114625 ~ 86121138 (+)
LOC110498335 LOC106561359 coding upstream 439241 86042800 ~ 86111227 (+)
LOC110498585 LOC106561449 coding downstream 4602 86555475 ~ 86564249 (+)
LOC110498595 LOC106561448 coding downstream 22696 86573569 ~ 86624542 (+)
trnag-gcc-2 NA coding downstream 168743 86719616 ~ 86719686 (+)
trnag-gcc-3 NA coding downstream 169496 86720369 ~ 86720439 (+)
trnag-gcc-4 NA coding downstream 171755 86722628 ~ 86722698 (+)
G197307 NA non-coding upstream 17979 86532289 ~ 86532489 (+)
G197305 NA non-coding upstream 19759 86530342 ~ 86530709 (+)
G197304 NA non-coding upstream 22679 86527514 ~ 86527789 (+)
G197303 NA non-coding upstream 23059 86527187 ~ 86527409 (+)
G197244 NA non-coding upstream 232489 86317641 ~ 86317979 (+)
G197863 NA non-coding downstream 21761 86572634 ~ 86572844 (+)
G197894 NA non-coding downstream 77441 86628314 ~ 86633193 (+)
G197905 NA non-coding downstream 97314 86648187 ~ 86648510 (+)
G197910 NA non-coding downstream 104108 86654981 ~ 86655321 (+)
G197911 NA non-coding downstream 105345 86656218 ~ 86658572 (+)
G197069 NA other upstream 413860 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1530434 85010068 ~ 85054392 (+)
G195155 NA other upstream 1950144 84596410 ~ 84600324 (+)
G194395 NA other upstream 2990870 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3425503 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 486638 87037511 ~ 87039236 (+)
G198575 NA other downstream 599329 87150202 ~ 87150490 (+)
G198784 NA other downstream 942750 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 985063 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 1316004 87866877 ~ 87867967 (+)

Expression


Co-expression Network