G197920


Basic Information

Item Value
gene id G197920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86671522 ~ 86707093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224033
gagcggtatgacggctgtgcggtcccatggagtttatacttgcgtactattgtttgtacagatgaacgtggtaccttggaaatttctcccaaggatgaaccaggcttgtggaggtctacaattgtttttctgatgtcttggctgatttcttttgattttcccatgatgtcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtaca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224033 True 224 lncRNA 0.39 2 86671522 86707093

Neighbor

gene id symbol gene type direction distance location
LOC110498595 LOC106561448 coding upstream 46980 86573569 ~ 86624542 (+)
LOC110498585 LOC106561449 coding upstream 107273 86555475 ~ 86564249 (+)
LOC110498438 LOC106561350 coding upstream 150920 86481275 ~ 86520602 (+)
LOC110498407 LOC106561353 coding upstream 193684 86423710 ~ 86477838 (+)
LOC110498357 LOC106561358 coding upstream 540055 86124758 ~ 86131467 (+)
trnag-gcc-2 NA coding downstream 12523 86719616 ~ 86719686 (+)
trnag-gcc-3 NA coding downstream 13276 86720369 ~ 86720439 (+)
trnag-gcc-4 NA coding downstream 15535 86722628 ~ 86722698 (+)
trnag-gcc-5 NA coding downstream 17794 86724887 ~ 86724957 (+)
trnag-gcc-6 NA coding downstream 18547 86725640 ~ 86725710 (+)
G197912 LOC106561447 non-coding upstream 12207 86658695 ~ 86659315 (+)
G197911 NA non-coding upstream 12950 86656218 ~ 86658572 (+)
G197910 NA non-coding upstream 16201 86654981 ~ 86655321 (+)
G197905 NA non-coding upstream 23012 86648187 ~ 86648510 (+)
G197894 NA non-coding upstream 38329 86628314 ~ 86633193 (+)
G197901 NA non-coding downstream 426 86707519 ~ 86708255 (+)
G198056 NA non-coding downstream 43133 86750226 ~ 86750662 (+)
G198070 LOC106581475 non-coding downstream 51760 86758853 ~ 86759083 (+)
G198071 NA non-coding downstream 52292 86759385 ~ 86759611 (+)
G198086 NA non-coding downstream 65431 86772524 ~ 86772807 (+)
G197069 NA other upstream 534914 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1651488 85010068 ~ 85054392 (+)
G195155 NA other upstream 2071198 84596410 ~ 84600324 (+)
G194395 NA other upstream 3111924 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3546557 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 330418 87037511 ~ 87039236 (+)
G198575 NA other downstream 443109 87150202 ~ 87150490 (+)
G198784 NA other downstream 786530 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 828843 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 1159784 87866877 ~ 87867967 (+)

Expression


Co-expression Network