G198254


Basic Information

Item Value
gene id G198254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86900870 ~ 86901071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224411
ATGAAACACAGAAATGTATTCCAGATATAAGTTTATGATCTAATcctttgtttatttttctttgacAGGTTATCAAAATGTTACCTATCAGAGGTTTGGACATAAAAGTGGTACTTGTATCACTCTGCATGTTATACTATTCAACGCTATCAGAAGGACGACCATTGAGGTAGGTTTGAACTCTATATGCAGTGTTTAGAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224411 True 202 lncRNA 0.33 1 86900870 86901071

Neighbor

gene id symbol gene type direction distance location
LOC118942939 NA coding upstream 12844 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 15498 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 27605 86787804 ~ 86873265 (+)
trnag-gcc-9 NA coding upstream 172915 86727885 ~ 86727955 (+)
trnag-gcc-8 NA coding upstream 173654 86727146 ~ 86727216 (+)
LOC110498720 LOC106561456 coding downstream 9399 86910470 ~ 86937217 (+)
si:ch211-266k8.4 LOC106561457 coding downstream 72256 86973327 ~ 87027553 (+)
dkk3b LOC106561478 coding downstream 366863 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 387691 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 434726 87335797 ~ 87338557 (+)
G198234 NA non-coding upstream 24879 86875703 ~ 86875991 (+)
G198153 NA non-coding upstream 33514 86867069 ~ 86867356 (+)
G198152 NA non-coding upstream 33986 86866678 ~ 86866884 (+)
G198257 NA non-coding downstream 4880 86905951 ~ 86906474 (+)
G198258 NA non-coding downstream 5412 86906483 ~ 86906780 (+)
G198328 NA non-coding downstream 121198 87022269 ~ 87022751 (+)
G198479 NA non-coding downstream 216004 87117075 ~ 87117488 (+)
G198482 NA non-coding downstream 218717 87119788 ~ 87120017 (+)
G197069 NA other upstream 764262 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1880836 85010068 ~ 85054392 (+)
G195155 NA other upstream 2300546 84596410 ~ 84600324 (+)
G194395 NA other upstream 3341272 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3775905 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 136440 87037511 ~ 87039236 (+)
G198575 NA other downstream 249131 87150202 ~ 87150490 (+)
G198784 NA other downstream 592552 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 634865 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 965806 87866877 ~ 87867967 (+)

Expression


Co-expression Network