G198342 (LOC100194703)


Basic Information

Item Value
gene id G198342
gene name LOC100194703
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86903036 ~ 86903956 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224521
CCCCTGAGGAGCTAACCTCAGCAACCAATCACCTCCCATTTGAGGCATAAAGATACTGGGATGCGTTCAGTTCAATTGAACATTTGCTATGTAGCGGAATAGTTTATACGTTTTCCCACAACCTTCTGGAACAGACTTTCCCAtgcaaaaaaagattgcagtcagagtgcagtataactacaatacaatcgtggccaaaagttttgagagtgacacaaatattcattttcacaaagctgcctcagtttgtaggatggcaatttgcatatactccagaatgttatgaagagtgatcagatgaattgcaaagtcaaTGCAAATTAACTGAACCCCCGCAAAAAAtgtcactgcatttcagccctgccacaaaaggaccagctgacatgtcagtgattctctcgttaacacaggtgtgagtgttgaggaggacaaggctggagatcactctgtcatgctgattgagttcgaataacagactggaagcttcaaaaggaaggtggtgcttggaatcattgttcttcctctgtcaagcatggttacctgcaaggaaacacgtgccgtcatcattgctttgcacaaaaagggcttcacaggcaaggatattgctgccagtaagattgcacctaaatcaaccatttatcggatcatcaagaacttcaaggagagcggttcaattgttgtgaagaaggcttcagggcgcccaagaaagtccagcaagcgccaggaccgtctcctaaagttgattcagctgcgggatcggggcaccaccagtacagagcttgctcaggaatggcagcaggcaggtgtgcaTCTGCACttacagtgaggcgaagacttttggaggatggcctggtgtcaagaagggcagcaaagaagccacttctatccaggaaaaacatcagggacagactgatattctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224521 True 921 TUCP 0.46 1 86903036 86903956

Neighbor

gene id symbol gene type direction distance location
LOC118942938 LOC106561453 coding downstream 15697 86885163 ~ 86887339 (-)
LOC110533876 NA coding downstream 155722 86743932 ~ 86747314 (-)
zpd LOC106594968 coding downstream 183864 86715060 ~ 86719172 (-)
LOC110498636 LOC106561446 coding downstream 188040 86707476 ~ 86714996 (-)
LOC118942936 LOC106611498 coding downstream 201785 86699341 ~ 86701251 (-)
LOC110498693 LOC106561455 coding upstream 34339 86938295 ~ 86967505 (-)
rassf10a LOC106561459 coding upstream 133338 87037294 ~ 87039516 (-)
LOC110498779 LOC106561460 coding upstream 139933 87043889 ~ 87138769 (-)
LOC110498811 NA coding upstream 240767 87144723 ~ 87150107 (-)
mical2b LOC106573205 coding upstream 266154 87170110 ~ 87259603 (-)
G198231 NA non-coding downstream 29836 86871246 ~ 86873200 (-)
G198230 NA non-coding downstream 32401 86870424 ~ 86870635 (-)
G198224 NA non-coding downstream 39775 86862908 ~ 86863261 (-)
G198074 NA non-coding downstream 142104 86760709 ~ 86760932 (-)
G198034 NA non-coding downstream 170876 86728503 ~ 86732160 (-)
G198334 LOC106561456 non-coding upstream 31447 86935403 ~ 86937181 (-)
G198543 NA non-coding upstream 206565 87110521 ~ 87110780 (-)
G198547 NA non-coding upstream 209466 87113422 ~ 87113621 (-)
G198552 NA non-coding upstream 218787 87122743 ~ 87123099 (-)
G198562 NA non-coding upstream 229063 87133019 ~ 87133236 (-)
G197554 NA other downstream 939371 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 1059543 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 2263280 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 2920869 83977965 ~ 83982167 (-)
G195427 NA other downstream 2998585 83881540 ~ 83904451 (-)
G198912 NA other upstream 418183 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 2702881 89606837 ~ 89609890 (-)
G202279 NA other upstream 3473601 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 4685256 91589212 ~ 91591049 (-)
G204024 NA other upstream 4883231 91787187 ~ 91788103 (-)

Expression


Co-expression Network