G198417 (LOC106561459)



Basic Information


Item Value
gene id G198417
gene name LOC106561459
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87037511 ~ 87039236 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU224599
agtcatataGCAGACGCTGTTATACAGAGCAACTtacaagtgccttgctcaagggcacatatacatatgtttcacctagtcaggtcagggattcgaaccaggaacCTTTAGGTCAgatgctcttaactgctaggctacctgacgccttATAGATGTTAAGTGTCCATGCTTATGCCTTTTGGAGGAAAAGGAGAAACATATTGTTTAGTGTGGAGAATGTCACTGTCCCTGAGTTGGCATTGCATATTTTCAACACTTCAATAAAGAGTTACACTAGTGATTCACAAACAGGTGTATTGTCAGAGTCCTGGCTATGCATGGAGCTCAGCCCCGTGTCTGAGTCCTCATCGTTCGTGTTGCTGGTCTTGGAGAGACCTCTGGCCTGCTCCACCCACCCACTGCTCTTCTCCAAGGAAGGCAACATTTCAGTCTCAGTGACACCAGAGGGTTCTTTGTAACCATCGGGTAACTTCTCGTTATTTAAATCCATAGAGTCCATTTTTGCGAGCAAATCCGTTAGTTCTTTTTCTTTTGCGTCCCACAGCTCCTGGCTTAAGTCCAAATCACCCTTAATAGTCTCTAAATCTGTGTTCAAACGAAGACCAATATATAAACTAGTATCCAGCTGTATTttgactctctcctcctctaaaaCCAAGTCATTCTCTGATAAACTGTCCACAGTTGTCTCTTGAGCAGCGACGCCTGCCTTTGGAGCCATTGCAGACACGGGGATGTCGACAGACTCCCCAATACTATCGGTATCTTTGCCCGACAGCTCATCTTGACGTCTTTTCATCCACCTTTGGTTCAGCTCCTCCTGAATCTCACCTGTGATGATGTCCATGAGAGCTTCGCGTTCTGTCAACTCCTCCTGAAGTCGCAGGACCACCTCGCAACAGAGCGCGTACTCCTCAAACTGTGCGATAGCCTCCGCTGAACATGGCACGCTCTCTGTTGGATCAGCCTTCGCGCTTGACTCCACCATGTATGTGTCCTGCACATAATTGATACCATGTTTCTTAATTCTGTCAAAATGCACTTTTGCCTCATACCTCTCTATAGCCCTATCTAATTCTTTGATCCTTTTGATCTGCTGGCGGATGGTGTGATCTTGCGATATAACCAAGTGCACCAACgtttccactttctccactgaGGATGTATCCTTAGGAACAGTCTCCTCTttctttttgtttattttgtccaACTTTCTAAAAGCTTTTCTAACAATCCTCCGCTGCTTTTCTTGTGAGAAAGCCATTGTGGTCTTGGCTGCTTCCTTGAACACGCACGGACTATCTTTGCTCTGAACAACCCGCGCCTCGGCACTCCTGGGTCCGTTGTTCGGTAACGATGCCTCATTCTTCACCAACACAAACCTCACATTTTCCTGCTCATCTCCCCAGGCACTCCAGAGACGCAGGATTTTGGTTTTATTGGGTAAAATCCTCTCAAAGCCTCTCCATTTCTCCGCTATGCAGTAAGACTGGGGGGTCCCAGATAGCATCACCGCTGACGCACCTTGCTTCAAGTTTTGGTCCTCCAGTAGAACTTTGACAACATCGGAGCAGGTGGTGCGCTTGGACAGCCCGGAGACCAGTTTCTCCTCCCGGCAGACCCATACTGATACCTTGCATTCTTCCTGCTCCATACTAGGAAAAACCTTTAACCCAATTGCTGATTACAGTTTCTGCTCTCCTTTCGACTCCTCGGTTCCACTTTT

Function


NR:

description
ras association domain-containing protein 10-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU224599 True 1726 TUCP 0.47 1 87037511 87039236

Neighbor


gene id symbol gene type direction distance location
si:ch211-266k8.4 LOC106561457 coding upstream 9958 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 100294 86910470 ~ 86937217 (+)
LOC118942939 NA coding upstream 149485 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 152139 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 164246 86787804 ~ 86873265 (+)
dkk3b LOC106561478 coding downstream 228698 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 249526 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 296561 87335797 ~ 87338557 (+)
LOC118942946 ovch2 coding downstream 301674 87340910 ~ 87341891 (+)
LOC110498866 ovch2 coding downstream 306362 87345598 ~ 87351199 (+)
G198328 NA non-coding upstream 14760 87022269 ~ 87022751 (+)
G198258 NA non-coding upstream 130731 86906483 ~ 86906780 (+)
G198257 NA non-coding upstream 131037 86905951 ~ 86906474 (+)
G198254 NA non-coding upstream 136440 86900870 ~ 86901071 (+)
G198479 NA non-coding downstream 77839 87117075 ~ 87117488 (+)
G198482 NA non-coding downstream 80552 87119788 ~ 87120017 (+)
G198569 NA non-coding downstream 104308 87143544 ~ 87144263 (+)
G198571 NA non-coding downstream 106625 87145861 ~ 87146134 (+)
G198586 NA non-coding downstream 128071 87167307 ~ 87167539 (+)
G197069 NA other upstream 900903 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2017477 85010068 ~ 85054392 (+)
G195155 NA other upstream 2437187 84596410 ~ 84600324 (+)
G194395 NA other upstream 3477913 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3912546 83119221 ~ 83124965 (+)
G198575 NA other downstream 110966 87150202 ~ 87150490 (+)
G198784 NA other downstream 454387 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 496700 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 827641 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2380533 89395057 ~ 89422438 (+)

Expression



Co-expression Network