G198482


Basic Information

Item Value
gene id G198482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87119788 ~ 87120017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224676
CATCATATTTTACTATCTCTCTCACTGCAGTTGTTCTCAGGAGACGGGTCATTGTGTTAGTAGAGAACAAGGTGGAGTCCGACAAAGTGGAGTCAGATCAGGTTTCTACTTCATCGCCCTGGACCACTAAACATACGAGGCAGAGGACGCAAAATTTGGACCTGTGAGTCGCCTTTGACCTTGACGTAACTTTCTTCTTAGGCTTTTGCGATCATGGGTGTTCCCTAACT

Function

NR:

description
PREDICTED: laminin subunit beta-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224676 True 230 lncRNA 0.41 1 87119788 87120017

Neighbor

gene id symbol gene type direction distance location
si:ch211-266k8.4 LOC106561457 coding upstream 92235 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 182571 86910470 ~ 86937217 (+)
LOC118942939 NA coding upstream 231762 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 234416 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 246523 86787804 ~ 86873265 (+)
dkk3b LOC106561478 coding downstream 147917 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 168745 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 215780 87335797 ~ 87338557 (+)
LOC118942946 ovch2 coding downstream 220893 87340910 ~ 87341891 (+)
LOC110498866 ovch2 coding downstream 225581 87345598 ~ 87351199 (+)
G198479 NA non-coding upstream 2300 87117075 ~ 87117488 (+)
G198328 NA non-coding upstream 97037 87022269 ~ 87022751 (+)
G198258 NA non-coding upstream 213008 86906483 ~ 86906780 (+)
G198257 NA non-coding upstream 213314 86905951 ~ 86906474 (+)
G198254 NA non-coding upstream 218717 86900870 ~ 86901071 (+)
G198569 NA non-coding downstream 23527 87143544 ~ 87144263 (+)
G198571 NA non-coding downstream 25844 87145861 ~ 87146134 (+)
G198586 NA non-coding downstream 47290 87167307 ~ 87167539 (+)
G198587 NA non-coding downstream 47736 87167753 ~ 87167956 (+)
G198589 NA non-coding downstream 49324 87169341 ~ 87169648 (+)
G198417 LOC106561459 other upstream 80552 87037511 ~ 87039236 (+)
G197069 NA other upstream 983180 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2099754 85010068 ~ 85054392 (+)
G195155 NA other upstream 2519464 84596410 ~ 84600324 (+)
G194395 NA other upstream 3560190 83558920 ~ 83559598 (+)
G198575 NA other downstream 30185 87150202 ~ 87150490 (+)
G198784 NA other downstream 373606 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 415919 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 746860 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2299752 89395057 ~ 89422438 (+)

Expression


Co-expression Network