G198586


Basic Information

Item Value
gene id G198586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87167307 ~ 87167539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU224789
ATGTAAAAGATGGCTAGTCATTATTATCCTGGTTCTGTACGGAATGCAGGCACATTATGGGACACAGGCCAggttattattaataataatacaaaagaggccacaagccatcaaacaaagcCAAGCTGCTTGAATTGTTGTGCCAGGAGTGGCATAaagtcacccaaaatcaaatgtgaaagactggtgccaagacgcatgaaagctgtgattgaaaaACAGGGTTATTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224789 True 233 lncRNA 0.53 1 87167307 87167539

Neighbor

gene id symbol gene type direction distance location
si:ch211-266k8.4 LOC106561457 coding upstream 139754 86973327 ~ 87027553 (+)
LOC110498720 LOC106561456 coding upstream 230090 86910470 ~ 86937217 (+)
LOC118942939 NA coding upstream 279281 86887279 ~ 86888026 (+)
zgc:162634 NA coding upstream 281935 86884172 ~ 86898082 (+)
LOC110498682 LOC106561452 coding upstream 294042 86787804 ~ 86873265 (+)
dkk3b LOC106561478 coding downstream 100395 87267934 ~ 87276184 (+)
far1 LOC106561480 coding downstream 121223 87288762 ~ 87323586 (+)
LOC118937298 ovch2 coding downstream 168258 87335797 ~ 87338557 (+)
LOC118942946 ovch2 coding downstream 173371 87340910 ~ 87341891 (+)
LOC110498866 ovch2 coding downstream 178059 87345598 ~ 87351199 (+)
G198571 NA non-coding upstream 21173 87145861 ~ 87146134 (+)
G198569 NA non-coding upstream 23044 87143544 ~ 87144263 (+)
G198482 NA non-coding upstream 47290 87119788 ~ 87120017 (+)
G198479 NA non-coding upstream 49819 87117075 ~ 87117488 (+)
G198328 NA non-coding upstream 144556 87022269 ~ 87022751 (+)
G198587 NA non-coding downstream 214 87167753 ~ 87167956 (+)
G198589 NA non-coding downstream 1802 87169341 ~ 87169648 (+)
G198650 LOC107575789 non-coding downstream 97215 87264754 ~ 87264985 (+)
G198651 NA non-coding downstream 97722 87265261 ~ 87265621 (+)
G198717 NA non-coding downstream 136522 87304061 ~ 87304260 (+)
G198575 NA other upstream 16817 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 128071 87037511 ~ 87039236 (+)
G197069 NA other upstream 1030699 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 2147273 85010068 ~ 85054392 (+)
G195155 NA other upstream 2566983 84596410 ~ 84600324 (+)
G198784 NA other downstream 326084 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 368397 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 699338 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 2252230 89395057 ~ 89422438 (+)
G202039 NA other downstream 3279579 90447118 ~ 90447573 (+)

Expression


Co-expression Network