G198917


Basic Information

Item Value
gene id G198917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87302800 ~ 87303618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU225178
cccgcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatcatgctgcatacccgtgcttcacggtttggatggtgttcttcagcttgcaagcctccccctttttctttcaaacatgacgatggtcattagggccaaacagttctatttttgtttcatcagaccagattacatttctccaaaaagcacaatctttgtccccatgtgcagttgcaaaccgtagtctggcttttttatggtggctttggagcagtggcgtcttccttgctgagtggcctttcagcttatgccgatataggactcgttttaccgtggatattgatacttttgtacctgttttctccagcattttcacaaggtcctttgctgttgttctgggattgatttgcactttttgtaccaaagtacgttcatctctaggagacagaatgcctctccttcctgagcagtatgacagctgcgtggtctcatggtgtttatacttgcgtactattgtttgtacagatgaacgtgataccttcaggcatttggaaattgctcccaaggatgaaccagacttgcggagatctacaattatttttccgcggtcttggctgatttcatttgattttcccatgatggcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtaatcctccaattgactcaaacgatatcaattagcctatcagaagcttctaaagtcattacataattttctggaattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225178 True 819 lncRNA 0.43 1 87302800 87303618

Neighbor

gene id symbol gene type direction distance location
mical2b LOC106573205 coding downstream 43197 87170110 ~ 87259603 (-)
LOC110498811 NA coding downstream 152693 87144723 ~ 87150107 (-)
LOC110498779 LOC106561460 coding downstream 164031 87043889 ~ 87138769 (-)
rassf10a LOC106561459 coding downstream 263284 87037294 ~ 87039516 (-)
LOC110498693 LOC106561455 coding downstream 335295 86938295 ~ 86967505 (-)
LOC110498882 NA coding upstream 60632 87364250 ~ 87366299 (-)
ppfibp2b LOC100380737 coding upstream 62545 87366163 ~ 87492584 (-)
olfml1 LOC106561482 coding upstream 188983 87492601 ~ 87496745 (-)
syt9b LOC106561481 coding upstream 215302 87518920 ~ 87543745 (-)
LOC110498902 LOC106561484 coding upstream 261710 87565328 ~ 87689612 (-)
G198909 NA non-coding downstream 354 87302193 ~ 87302446 (-)
G198908 NA non-coding downstream 652 87301934 ~ 87302148 (-)
G198900 NA non-coding downstream 935 87289012 ~ 87301865 (-)
G198658 LOC106561478 non-coding downstream 26625 87267989 ~ 87276175 (-)
G198676 NA non-coding downstream 79422 87222452 ~ 87223378 (-)
G198922 NA non-coding upstream 5972 87309590 ~ 87309905 (-)
G198925 NA non-coding upstream 8242 87311860 ~ 87312168 (-)
G198929 NA non-coding upstream 12370 87315988 ~ 87316335 (-)
G198930 NA non-coding upstream 13980 87317598 ~ 87317929 (-)
G198931 NA non-coding upstream 15116 87318734 ~ 87319027 (-)
G198342 LOC100194703 other downstream 398844 86903036 ~ 86903956 (-)
G197554 NA other downstream 1339135 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 1459307 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 2663044 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 3320633 83977965 ~ 83982167 (-)
G198912 NA other upstream 18521 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 2303219 89606837 ~ 89609890 (-)
G202279 NA other upstream 3073939 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 4285594 91589212 ~ 91591049 (-)
G204024 NA other upstream 4483569 91787187 ~ 91788103 (-)

Expression


Co-expression Network