Gene
RNA
| Item | Value |
|---|---|
| gene id | G198974 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 87499554 ~ 87500280 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU225241 | True | 727 | lncRNA | 0.38 | 1 | 87499554 | 87500280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| olfml1 | LOC106561482 | coding | downstream | 2809 | 87492601 ~ 87496745 (-) |
| ppfibp2b | LOC100380737 | coding | downstream | 6970 | 87366163 ~ 87492584 (-) |
| LOC110498882 | NA | coding | downstream | 133255 | 87364250 ~ 87366299 (-) |
| mical2b | LOC106573205 | coding | downstream | 239951 | 87170110 ~ 87259603 (-) |
| LOC110498811 | NA | coding | downstream | 349447 | 87144723 ~ 87150107 (-) |
| syt9b | LOC106561481 | coding | upstream | 18640 | 87518920 ~ 87543745 (-) |
| LOC110498902 | LOC106561484 | coding | upstream | 65048 | 87565328 ~ 87689612 (-) |
| kiaa1549la | kiaa1549l | coding | upstream | 301782 | 87802062 ~ 87854859 (-) |
| LOC110498926 | hipk3 | coding | upstream | 359077 | 87859357 ~ 87900425 (-) |
| LOC110498933 | depdc7 | coding | upstream | 407219 | 87907499 ~ 87911415 (-) |
| G198975 | NA | non-coding | downstream | 964 | 87497115 ~ 87498590 (-) |
| G198913 | NA | non-coding | downstream | 136248 | 87362386 ~ 87363306 (-) |
| G198915 | NA | non-coding | downstream | 138397 | 87360648 ~ 87361157 (-) |
| G198914 | NA | non-coding | downstream | 139409 | 87358948 ~ 87360145 (-) |
| G198942 | NA | non-coding | downstream | 159948 | 87339254 ~ 87339606 (-) |
| G199004 | NA | non-coding | upstream | 47836 | 87548116 ~ 87548338 (-) |
| G199005 | NA | non-coding | upstream | 48292 | 87548572 ~ 87548793 (-) |
| G199006 | NA | non-coding | upstream | 51375 | 87551655 ~ 87551883 (-) |
| G199063 | NA | non-coding | upstream | 163506 | 87663786 ~ 87664315 (-) |
| G199086 | NA | non-coding | upstream | 198024 | 87698304 ~ 87698579 (-) |
| G198912 | NA | other | downstream | 173085 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 595598 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 1535889 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 1656061 | 85831239 ~ 85843493 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 2859798 | 84596433 ~ 84910878 (-) |
| LOC110499346 | vps4a | other | upstream | 2106557 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 2877277 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 4088932 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 4286907 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 4897780 | 92398054 ~ 92443838 (-) |
