Gene
RNA
| Item | Value |
|---|---|
| gene id | G199096 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 87707801 ~ 87708028 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106600263, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU225399 | True | 228 | lncRNA | 0.45 | 1 | 87707801 | 87708028 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942948 | ovch2 | coding | upstream | 354098 | 87351440 ~ 87353703 (+) |
| LOC110498866 | ovch2 | coding | upstream | 356602 | 87345598 ~ 87351199 (+) |
| LOC118942946 | ovch2 | coding | upstream | 365910 | 87340910 ~ 87341891 (+) |
| LOC118937298 | ovch2 | coding | upstream | 369244 | 87335797 ~ 87338557 (+) |
| far1 | LOC106561480 | coding | upstream | 384215 | 87288762 ~ 87323586 (+) |
| LOC110498941 | ccdc73 | coding | downstream | 204504 | 87912532 ~ 87931639 (+) |
| wt-t1b | wt1 | coding | downstream | 238445 | 87946473 ~ 87966277 (+) |
| LOC110498955 | LOC105030318 | coding | downstream | 342070 | 88050098 ~ 88070895 (+) |
| mpped2 | mppd2 | coding | downstream | 655283 | 88363311 ~ 88389495 (+) |
| LOC110499041 | LOC106561493 | coding | downstream | 690609 | 88398637 ~ 88567065 (+) |
| G198839 | NA | non-coding | upstream | 144062 | 87563519 ~ 87563739 (+) |
| G198826 | NA | non-coding | upstream | 152669 | 87554908 ~ 87555132 (+) |
| G198821 | NA | non-coding | upstream | 162649 | 87544787 ~ 87545152 (+) |
| G198820 | NA | non-coding | upstream | 163222 | 87544379 ~ 87544579 (+) |
| G198783 | NA | non-coding | upstream | 207677 | 87499847 ~ 87500124 (+) |
| G199113 | NA | non-coding | downstream | 13594 | 87721622 ~ 87721918 (+) |
| G199116 | NA | non-coding | downstream | 18614 | 87726642 ~ 87726947 (+) |
| G199117 | NA | non-coding | downstream | 19654 | 87727682 ~ 87727931 (+) |
| G199119 | NA | non-coding | downstream | 23317 | 87731345 ~ 87731670 (+) |
| G199134 | NA | non-coding | downstream | 44287 | 87752315 ~ 87752529 (+) |
| G198811 | LOC106561481 | other | upstream | 170873 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 211066 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 557311 | 87150202 ~ 87150490 (+) |
| G198417 | LOC106561459 | other | upstream | 668565 | 87037511 ~ 87039236 (+) |
| G197069 | NA | other | upstream | 1571193 | 86135616 ~ 86136608 (+) |
| G199223 | hipk3 | other | downstream | 158849 | 87866877 ~ 87867967 (+) |
| LOC110499234 | rbl2 | other | downstream | 1711741 | 89395057 ~ 89422438 (+) |
| G202039 | NA | other | downstream | 2739090 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 3008914 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 3528997 | 91235465 ~ 91239737 (+) |
