G199116


Basic Information

Item Value
gene id G199116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87726642 ~ 87726947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU225419
gctgcagtgtgtgcaaacctggtccagaactacaggaaacgtatgatctctgtaattgcaaacaaaggtttctgtaacaaatattaagttctgcttttctgatgtattaaataattatgtcatgcaataaaatgcaaattaattacttaaaaatcatacaatgtgattttctggattttagattccgtctctcacagttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtaggaaaacctgcaaaatcgtcagtatatcaaatacttgttctccccactgtatgtgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225419 True 306 lncRNA 0.40 1 87726642 87726947

Neighbor

gene id symbol gene type direction distance location
LOC118942948 ovch2 coding upstream 372939 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 375443 87345598 ~ 87351199 (+)
LOC118942946 ovch2 coding upstream 384751 87340910 ~ 87341891 (+)
LOC118937298 ovch2 coding upstream 388085 87335797 ~ 87338557 (+)
far1 LOC106561480 coding upstream 403056 87288762 ~ 87323586 (+)
LOC110498941 ccdc73 coding downstream 185585 87912532 ~ 87931639 (+)
wt-t1b wt1 coding downstream 219526 87946473 ~ 87966277 (+)
LOC110498955 LOC105030318 coding downstream 323151 88050098 ~ 88070895 (+)
mpped2 mppd2 coding downstream 636364 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 671690 88398637 ~ 88567065 (+)
G199113 NA non-coding upstream 4724 87721622 ~ 87721918 (+)
G199096 NA non-coding upstream 18614 87707801 ~ 87708028 (+)
G198839 NA non-coding upstream 162903 87563519 ~ 87563739 (+)
G198826 NA non-coding upstream 171510 87554908 ~ 87555132 (+)
G198821 NA non-coding upstream 181490 87544787 ~ 87545152 (+)
G199117 NA non-coding downstream 735 87727682 ~ 87727931 (+)
G199119 NA non-coding downstream 4398 87731345 ~ 87731670 (+)
G199134 NA non-coding downstream 25368 87752315 ~ 87752529 (+)
G199138 NA non-coding downstream 30317 87757264 ~ 87757669 (+)
G199144 NA non-coding downstream 35632 87762579 ~ 87762797 (+)
G198811 LOC106561481 other upstream 189714 87535936 ~ 87536928 (+)
G198784 NA other upstream 229907 87493623 ~ 87496735 (+)
G198575 NA other upstream 576152 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 687406 87037511 ~ 87039236 (+)
G197069 NA other upstream 1590034 86135616 ~ 86136608 (+)
G199223 hipk3 other downstream 139930 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 1692822 89395057 ~ 89422438 (+)
G202039 NA other downstream 2720171 90447118 ~ 90447573 (+)
G202185 NA other downstream 2989995 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 3510078 91235465 ~ 91239737 (+)

Expression


Co-expression Network