G199134



Basic Information


Item Value
gene id G199134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87752315 ~ 87752529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU225439
taaaaaacgtttgacatgtttctacgaactttacggatactatttggaattttcgtctgcccggtcgtgaccgctcgagcctgtgcatttctgaacataacgcgccaaccaaatggaggtattttggatataaaaataatctttgtggaacaaaaggaacatttattgtgtaactgggagtcttgtgagtgcaaacatccgaagatcatcaaagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU225439 True 215 lncRNA 0.40 1 87752315 87752529

Neighbor


gene id symbol gene type direction distance location
LOC118942948 ovch2 coding upstream 398612 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 401116 87345598 ~ 87351199 (+)
LOC118942946 ovch2 coding upstream 410424 87340910 ~ 87341891 (+)
LOC118937298 ovch2 coding upstream 413758 87335797 ~ 87338557 (+)
far1 LOC106561480 coding upstream 428729 87288762 ~ 87323586 (+)
LOC110498941 ccdc73 coding downstream 160003 87912532 ~ 87931639 (+)
wt-t1b wt1 coding downstream 193944 87946473 ~ 87966277 (+)
LOC110498955 LOC105030318 coding downstream 297569 88050098 ~ 88070895 (+)
mpped2 mppd2 coding downstream 610782 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 646108 88398637 ~ 88567065 (+)
G199119 NA non-coding upstream 20645 87731345 ~ 87731670 (+)
G199117 NA non-coding upstream 24384 87727682 ~ 87727931 (+)
G199116 NA non-coding upstream 25368 87726642 ~ 87726947 (+)
G199113 NA non-coding upstream 30397 87721622 ~ 87721918 (+)
G199096 NA non-coding upstream 44287 87707801 ~ 87708028 (+)
G199138 NA non-coding downstream 4735 87757264 ~ 87757669 (+)
G199144 NA non-coding downstream 10050 87762579 ~ 87762797 (+)
G199174 NA non-coding downstream 49546 87802075 ~ 87804686 (+)
G199218 hipk3 non-coding downstream 102874 87855403 ~ 87859905 (+)
G199391 NA non-coding downstream 214424 87966953 ~ 87967511 (+)
G198811 LOC106561481 other upstream 215387 87535936 ~ 87536928 (+)
G198784 NA other upstream 255580 87493623 ~ 87496735 (+)
G198575 NA other upstream 601825 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 713079 87037511 ~ 87039236 (+)
G197069 NA other upstream 1615707 86135616 ~ 86136608 (+)
G199223 hipk3 other downstream 114348 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 1667240 89395057 ~ 89422438 (+)
G202039 NA other downstream 2694589 90447118 ~ 90447573 (+)
G202185 NA other downstream 2964413 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 3484496 91235465 ~ 91239737 (+)

Expression



Co-expression Network