G199138


Basic Information

Item Value
gene id G199138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87757264 ~ 87757669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU225443
CTTCAGGACAATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAACGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAACGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGAGCTTCAGGACTATCAAACTGTAACGTTTCAGGACTATCAAACTGTAACGCTTCAGGACTATCAAACTGAAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAGGACTATCAAACTGTAGCGCTTCAAGACTATCAAACTGTAG

Function

NR:

description
PREDICTED: extensin-1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225443 True 406 lncRNA 0.44 1 87757264 87757669

Neighbor

gene id symbol gene type direction distance location
LOC118942948 ovch2 coding upstream 403561 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 406065 87345598 ~ 87351199 (+)
LOC118942946 ovch2 coding upstream 415373 87340910 ~ 87341891 (+)
LOC118937298 ovch2 coding upstream 418707 87335797 ~ 87338557 (+)
far1 LOC106561480 coding upstream 433678 87288762 ~ 87323586 (+)
LOC110498941 ccdc73 coding downstream 154863 87912532 ~ 87931639 (+)
wt-t1b wt1 coding downstream 188804 87946473 ~ 87966277 (+)
LOC110498955 LOC105030318 coding downstream 292429 88050098 ~ 88070895 (+)
mpped2 mppd2 coding downstream 605642 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 640968 88398637 ~ 88567065 (+)
G199134 NA non-coding upstream 4735 87752315 ~ 87752529 (+)
G199119 NA non-coding upstream 25594 87731345 ~ 87731670 (+)
G199117 NA non-coding upstream 29333 87727682 ~ 87727931 (+)
G199116 NA non-coding upstream 30317 87726642 ~ 87726947 (+)
G199113 NA non-coding upstream 35346 87721622 ~ 87721918 (+)
G199144 NA non-coding downstream 4910 87762579 ~ 87762797 (+)
G199174 NA non-coding downstream 44406 87802075 ~ 87804686 (+)
G199218 hipk3 non-coding downstream 97734 87855403 ~ 87859905 (+)
G199391 NA non-coding downstream 209284 87966953 ~ 87967511 (+)
G199542 dnajc24 non-coding downstream 427761 88185430 ~ 88194347 (+)
G198811 LOC106561481 other upstream 220336 87535936 ~ 87536928 (+)
G198784 NA other upstream 260529 87493623 ~ 87496735 (+)
G198575 NA other upstream 606774 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 718028 87037511 ~ 87039236 (+)
G197069 NA other upstream 1620656 86135616 ~ 86136608 (+)
G199223 hipk3 other downstream 109208 87866877 ~ 87867967 (+)
LOC110499234 rbl2 other downstream 1662100 89395057 ~ 89422438 (+)
G202039 NA other downstream 2689449 90447118 ~ 90447573 (+)
G202185 NA other downstream 2959273 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 3479356 91235465 ~ 91239737 (+)

Expression


Co-expression Network