Gene
RNA
| Item | Value |
|---|---|
| gene id | G199378 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 87934375 ~ 87934585 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tyrosine--tRNA ligase, cytoplasmic |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU225727 | True | 211 | lncRNA | 0.44 | 1 | 87934375 | 87934585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498933 | depdc7 | coding | downstream | 22960 | 87907499 ~ 87911415 (-) |
| LOC110498926 | hipk3 | coding | downstream | 33950 | 87859357 ~ 87900425 (-) |
| kiaa1549la | kiaa1549l | coding | downstream | 79516 | 87802062 ~ 87854859 (-) |
| LOC110498902 | LOC106561484 | coding | downstream | 244763 | 87565328 ~ 87689612 (-) |
| syt9b | LOC106561481 | coding | downstream | 390630 | 87518920 ~ 87543745 (-) |
| dnajc24 | dnajc24 | coding | upstream | 250443 | 88185028 ~ 88205473 (-) |
| LOC110499068 | LOC106561495 | coding | upstream | 634766 | 88569351 ~ 88574203 (-) |
| LOC110499075 | LOC106561496 | coding | upstream | 695894 | 88630479 ~ 88656952 (-) |
| znf277 | znf277 | coding | upstream | 828973 | 88763558 ~ 88770972 (-) |
| LOC110533889 | NA | coding | upstream | 871503 | 88806088 ~ 88807501 (-) |
| G199369 | ccdc73 | non-coding | downstream | 2755 | 87919127 ~ 87931620 (-) |
| G199329 | NA | non-coding | downstream | 103134 | 87828180 ~ 87831241 (-) |
| G199267 | NA | non-coding | downstream | 212807 | 87721060 ~ 87721568 (-) |
| G199093 | NA | non-coding | downstream | 228386 | 87705611 ~ 87705989 (-) |
| G199092 | NA | non-coding | downstream | 229284 | 87704868 ~ 87705091 (-) |
| G199405 | NA | non-coding | upstream | 26644 | 87961229 ~ 87961440 (-) |
| G199406 | NA | non-coding | upstream | 27693 | 87962278 ~ 87963033 (-) |
| G199407 | NA | non-coding | upstream | 32088 | 87966673 ~ 87967599 (-) |
| G199408 | NA | non-coding | upstream | 33943 | 87968528 ~ 87969051 (-) |
| G199411 | NA | non-coding | upstream | 36966 | 87971551 ~ 87971774 (-) |
| G198912 | NA | other | downstream | 607906 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 1030419 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 1970710 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 2090882 | 85831239 ~ 85843493 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 3294619 | 84596433 ~ 84910878 (-) |
| LOC110499346 | vps4a | other | upstream | 1672252 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 2442972 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 3654627 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 3852602 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 4463475 | 92398054 ~ 92443838 (-) |
