G199731



Basic Information


Item Value
gene id G199731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88257207 ~ 88257452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU226113
CAGTAACCTTTGTCACTTGTTGTAAAACTAAAAAACTGTCATGTCACTGTTTTCTTTGACAAGAGTTGTGTGAAGCTGCCTAGTTATTCTCACATACTTGATTGTAAAGAACAACATGTTTTGAGACGATATCCTGACAGCTTTTTTACAATCCATTAGTTCCTGGAGCAACATCAGAAGGAAGTGGAGGTAGAGTGAAATTCCTGTTCGACACAGATGTCAGGATCAAAAGCCAGAGACATTCTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU226113 True 246 lncRNA 0.39 1 88257207 88257452

Neighbor


gene id symbol gene type direction distance location
LOC110498955 LOC105030318 coding upstream 186312 88050098 ~ 88070895 (+)
wt-t1b wt1 coding upstream 290930 87946473 ~ 87966277 (+)
LOC110498941 ccdc73 coding upstream 325568 87912532 ~ 87931639 (+)
LOC118942948 ovch2 coding upstream 903504 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 906008 87345598 ~ 87351199 (+)
mpped2 mppd2 coding downstream 105859 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 141185 88398637 ~ 88567065 (+)
LOC110499106 LOC106561497 coding downstream 365917 88623369 ~ 88630357 (+)
LOC110499113 LOC106561499 coding downstream 404461 88661913 ~ 88667515 (+)
LOC110499119 LOC106573246 coding downstream 433975 88691427 ~ 88726701 (+)
G199542 dnajc24 non-coding upstream 62860 88185430 ~ 88194347 (+)
G199391 NA non-coding upstream 289696 87966953 ~ 87967511 (+)
G199218 hipk3 non-coding upstream 397302 87855403 ~ 87859905 (+)
G199174 NA non-coding upstream 452521 87802075 ~ 87804686 (+)
G199144 NA non-coding upstream 494410 87762579 ~ 87762797 (+)
G199740 NA non-coding downstream 5180 88262632 ~ 88262883 (+)
G199743 NA non-coding downstream 8200 88265652 ~ 88266097 (+)
G199761 NA non-coding downstream 21241 88278693 ~ 88278908 (+)
G199765 NA non-coding downstream 23911 88281363 ~ 88281578 (+)
G199771 NA non-coding downstream 29243 88286695 ~ 88286916 (+)
G199223 hipk3 other upstream 389240 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 720279 87535936 ~ 87536928 (+)
G198784 NA other upstream 760472 87493623 ~ 87496735 (+)
G198575 NA other upstream 1106717 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1217971 87037511 ~ 87039236 (+)
LOC110499234 rbl2 other downstream 1162317 89395057 ~ 89422438 (+)
G202039 NA other downstream 2189666 90447118 ~ 90447573 (+)
G202185 NA other downstream 2459490 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2979573 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 3108885 91366282 ~ 91543765 (+)

Expression



Co-expression Network