Item | Value |
---|---|
gene id | G199731 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 88257207 ~ 88257452 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU226113 | True | 246 | lncRNA | 0.39 | 1 | 88257207 | 88257452 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110498955 | LOC105030318 | coding | upstream | 186312 | 88050098 ~ 88070895 (+) |
wt-t1b | wt1 | coding | upstream | 290930 | 87946473 ~ 87966277 (+) |
LOC110498941 | ccdc73 | coding | upstream | 325568 | 87912532 ~ 87931639 (+) |
LOC118942948 | ovch2 | coding | upstream | 903504 | 87351440 ~ 87353703 (+) |
LOC110498866 | ovch2 | coding | upstream | 906008 | 87345598 ~ 87351199 (+) |
mpped2 | mppd2 | coding | downstream | 105859 | 88363311 ~ 88389495 (+) |
LOC110499041 | LOC106561493 | coding | downstream | 141185 | 88398637 ~ 88567065 (+) |
LOC110499106 | LOC106561497 | coding | downstream | 365917 | 88623369 ~ 88630357 (+) |
LOC110499113 | LOC106561499 | coding | downstream | 404461 | 88661913 ~ 88667515 (+) |
LOC110499119 | LOC106573246 | coding | downstream | 433975 | 88691427 ~ 88726701 (+) |
G199542 | dnajc24 | non-coding | upstream | 62860 | 88185430 ~ 88194347 (+) |
G199391 | NA | non-coding | upstream | 289696 | 87966953 ~ 87967511 (+) |
G199218 | hipk3 | non-coding | upstream | 397302 | 87855403 ~ 87859905 (+) |
G199174 | NA | non-coding | upstream | 452521 | 87802075 ~ 87804686 (+) |
G199144 | NA | non-coding | upstream | 494410 | 87762579 ~ 87762797 (+) |
G199740 | NA | non-coding | downstream | 5180 | 88262632 ~ 88262883 (+) |
G199743 | NA | non-coding | downstream | 8200 | 88265652 ~ 88266097 (+) |
G199761 | NA | non-coding | downstream | 21241 | 88278693 ~ 88278908 (+) |
G199765 | NA | non-coding | downstream | 23911 | 88281363 ~ 88281578 (+) |
G199771 | NA | non-coding | downstream | 29243 | 88286695 ~ 88286916 (+) |
G199223 | hipk3 | other | upstream | 389240 | 87866877 ~ 87867967 (+) |
G198811 | LOC106561481 | other | upstream | 720279 | 87535936 ~ 87536928 (+) |
G198784 | NA | other | upstream | 760472 | 87493623 ~ 87496735 (+) |
G198575 | NA | other | upstream | 1106717 | 87150202 ~ 87150490 (+) |
G198417 | LOC106561459 | other | upstream | 1217971 | 87037511 ~ 87039236 (+) |
LOC110499234 | rbl2 | other | downstream | 1162317 | 89395057 ~ 89422438 (+) |
G202039 | NA | other | downstream | 2189666 | 90447118 ~ 90447573 (+) |
G202185 | NA | other | downstream | 2459490 | 90716942 ~ 90717421 (+) |
LOC110499641 | LOC106561583 | other | downstream | 2979573 | 91235465 ~ 91239737 (+) |
mgat4c | LOC106561589 | other | downstream | 3108885 | 91366282 ~ 91543765 (+) |