Gene
RNA
| Item | Value |
|---|---|
| gene id | G199787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 88296837 ~ 88297102 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU226170 | True | 266 | lncRNA | 0.38 | 1 | 88296837 | 88297102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498955 | LOC105030318 | coding | upstream | 225942 | 88050098 ~ 88070895 (+) |
| wt-t1b | wt1 | coding | upstream | 330560 | 87946473 ~ 87966277 (+) |
| LOC110498941 | ccdc73 | coding | upstream | 365198 | 87912532 ~ 87931639 (+) |
| LOC118942948 | ovch2 | coding | upstream | 943134 | 87351440 ~ 87353703 (+) |
| LOC110498866 | ovch2 | coding | upstream | 945638 | 87345598 ~ 87351199 (+) |
| mpped2 | mppd2 | coding | downstream | 66209 | 88363311 ~ 88389495 (+) |
| LOC110499041 | LOC106561493 | coding | downstream | 101535 | 88398637 ~ 88567065 (+) |
| LOC110499106 | LOC106561497 | coding | downstream | 326267 | 88623369 ~ 88630357 (+) |
| LOC110499113 | LOC106561499 | coding | downstream | 364811 | 88661913 ~ 88667515 (+) |
| LOC110499119 | LOC106573246 | coding | downstream | 394325 | 88691427 ~ 88726701 (+) |
| G199786 | NA | non-coding | upstream | 526 | 88296005 ~ 88296311 (+) |
| G199784 | NA | non-coding | upstream | 4000 | 88292602 ~ 88292837 (+) |
| G199771 | NA | non-coding | upstream | 9921 | 88286695 ~ 88286916 (+) |
| G199765 | NA | non-coding | upstream | 15259 | 88281363 ~ 88281578 (+) |
| G199761 | NA | non-coding | upstream | 17929 | 88278693 ~ 88278908 (+) |
| G199788 | NA | non-coding | downstream | 1304 | 88298406 ~ 88299589 (+) |
| G199790 | NA | non-coding | downstream | 15661 | 88312763 ~ 88312994 (+) |
| G199791 | NA | non-coding | downstream | 16385 | 88313487 ~ 88313946 (+) |
| G199799 | NA | non-coding | downstream | 26191 | 88323293 ~ 88323582 (+) |
| G199800 | NA | non-coding | downstream | 26593 | 88323695 ~ 88323919 (+) |
| G199223 | hipk3 | other | upstream | 428870 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 759909 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 800102 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 1146347 | 87150202 ~ 87150490 (+) |
| G198417 | LOC106561459 | other | upstream | 1257601 | 87037511 ~ 87039236 (+) |
| LOC110499234 | rbl2 | other | downstream | 1122667 | 89395057 ~ 89422438 (+) |
| G202039 | NA | other | downstream | 2150016 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 2419840 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 2939923 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 3069235 | 91366282 ~ 91543765 (+) |
