G199788


Basic Information

Item Value
gene id G199788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88298406 ~ 88299589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU226171
ctgtagattatgtgatatactgtaggtgatgtgctgtgatatactgtaggtgatgtgatgtgatatactgtaggtgatgtgatgtgatatactgtaggtgatgtgatgtgatatactgtaggtgatgtgatgtgatatactgtaggtgatgtgatatactgtagatgatgtgatatactgtaggtgatgtgatatactgtaggtgatgtgatgtgatatactttaggtgatgtgatgtgatatatTGTAggtgatgtgatatactgtaggtgatgtgatgtgatatactgtaggtgatgtgatatactgtaagtgatgtgatgtgatatactgtaggtgatgcgatatactgtaggtgatgtgatatactgtaggtgatgtgATATTCTGTAGGTGTtgtgatgtgatatactgtagatgatgtgatatactgtaggtgatgtgatgtgatatactgtagttgatgtgatatactgtaggttatgtgatgtgatatactgtagatgatgtgatatactgtagatgatgtgatatactgtaggtgatgtgatatactgtagatgatgtgatatactgtaggtgttgtgatgtgatatactgtagatgatgtgatatactgtagatg

Function

NR:

description
PREDICTED: S-antigen protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226171 True 625 lncRNA 0.36 2 88298406 88299589

Neighbor

gene id symbol gene type direction distance location
LOC110498955 LOC105030318 coding upstream 227511 88050098 ~ 88070895 (+)
wt-t1b wt1 coding upstream 332129 87946473 ~ 87966277 (+)
LOC110498941 ccdc73 coding upstream 366767 87912532 ~ 87931639 (+)
LOC118942948 ovch2 coding upstream 944703 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 947207 87345598 ~ 87351199 (+)
mpped2 mppd2 coding downstream 63722 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 99048 88398637 ~ 88567065 (+)
LOC110499106 LOC106561497 coding downstream 323780 88623369 ~ 88630357 (+)
LOC110499113 LOC106561499 coding downstream 362324 88661913 ~ 88667515 (+)
LOC110499119 LOC106573246 coding downstream 391838 88691427 ~ 88726701 (+)
G199787 NA non-coding upstream 1304 88296837 ~ 88297102 (+)
G199786 NA non-coding upstream 2095 88296005 ~ 88296311 (+)
G199784 NA non-coding upstream 5569 88292602 ~ 88292837 (+)
G199771 NA non-coding upstream 11490 88286695 ~ 88286916 (+)
G199765 NA non-coding upstream 16828 88281363 ~ 88281578 (+)
G199790 NA non-coding downstream 13174 88312763 ~ 88312994 (+)
G199791 NA non-coding downstream 13898 88313487 ~ 88313946 (+)
G199799 NA non-coding downstream 23704 88323293 ~ 88323582 (+)
G199800 NA non-coding downstream 24106 88323695 ~ 88323919 (+)
G199808 NA non-coding downstream 46488 88346077 ~ 88346415 (+)
G199223 hipk3 other upstream 430439 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 761478 87535936 ~ 87536928 (+)
G198784 NA other upstream 801671 87493623 ~ 87496735 (+)
G198575 NA other upstream 1147916 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1259170 87037511 ~ 87039236 (+)
LOC110499234 rbl2 other downstream 1120180 89395057 ~ 89422438 (+)
G202039 NA other downstream 2147529 90447118 ~ 90447573 (+)
G202185 NA other downstream 2417353 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2937436 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 3066748 91366282 ~ 91543765 (+)

Expression


Co-expression Network