G199790



Basic Information


Item Value
gene id G199790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88312763 ~ 88312994 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU226175
CATCCTTCCAGCCTCAGAGCTAAACAGCTCATCTTCAATGGCCAGATAGAACTGGGAAATATTTCTGTCACTAATATTACCTTCACTCAGTCAGGCATACATCCCATATAGAAGCAGCCTCATTTAAACATGCTCCTCATACAACGCATAGAAATAACAGAGCTGTGTAGGTAACTATTAGTCTTCATTATACTGTCTCTCAAAGGATTCATTCTGTGCAGGAATAATCACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU226175 True 232 lncRNA 0.38 1 88312763 88312994

Neighbor


gene id symbol gene type direction distance location
LOC110498955 LOC105030318 coding upstream 241868 88050098 ~ 88070895 (+)
wt-t1b wt1 coding upstream 346486 87946473 ~ 87966277 (+)
LOC110498941 ccdc73 coding upstream 381124 87912532 ~ 87931639 (+)
LOC118942948 ovch2 coding upstream 959060 87351440 ~ 87353703 (+)
LOC110498866 ovch2 coding upstream 961564 87345598 ~ 87351199 (+)
mpped2 mppd2 coding downstream 50317 88363311 ~ 88389495 (+)
LOC110499041 LOC106561493 coding downstream 85643 88398637 ~ 88567065 (+)
LOC110499106 LOC106561497 coding downstream 310375 88623369 ~ 88630357 (+)
LOC110499113 LOC106561499 coding downstream 348919 88661913 ~ 88667515 (+)
LOC110499119 LOC106573246 coding downstream 378433 88691427 ~ 88726701 (+)
G199788 NA non-coding upstream 13174 88298406 ~ 88299589 (+)
G199787 NA non-coding upstream 15661 88296837 ~ 88297102 (+)
G199786 NA non-coding upstream 16452 88296005 ~ 88296311 (+)
G199784 NA non-coding upstream 19926 88292602 ~ 88292837 (+)
G199771 NA non-coding upstream 25847 88286695 ~ 88286916 (+)
G199791 NA non-coding downstream 493 88313487 ~ 88313946 (+)
G199799 NA non-coding downstream 10299 88323293 ~ 88323582 (+)
G199800 NA non-coding downstream 10701 88323695 ~ 88323919 (+)
G199808 NA non-coding downstream 33083 88346077 ~ 88346415 (+)
G199223 hipk3 other upstream 444796 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 775835 87535936 ~ 87536928 (+)
G198784 NA other upstream 816028 87493623 ~ 87496735 (+)
G198575 NA other upstream 1162273 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1273527 87037511 ~ 87039236 (+)
LOC110499234 rbl2 other downstream 1106775 89395057 ~ 89422438 (+)
G202039 NA other downstream 2134124 90447118 ~ 90447573 (+)
G202185 NA other downstream 2403948 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2924031 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 3053343 91366282 ~ 91543765 (+)

Expression



Co-expression Network