G199871


Basic Information

Item Value
gene id G199871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88430295 ~ 88430609 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU226269
AACATAGAGATAGAATATAGAGGTAGAACATTGAGATAGAACATAGAGGTAGAACATTGAGATAGAACATAGAGGTAGAACATCAAGGCAGAACATTGAGATAGAACCTAGAGGTAGAACATTGAGATAGAACATAGAGAAATAACATAGATATAGAACATAGAGGTAGAACATCGAGATAGAAATAGCAGTTGACTCAAGGGAAGAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226269 True 210 lncRNA 0.35 2 88430295 88430609

Neighbor

gene id symbol gene type direction distance location
mpped2 mppd2 coding upstream 40800 88363311 ~ 88389495 (+)
LOC110498955 LOC105030318 coding upstream 359400 88050098 ~ 88070895 (+)
wt-t1b wt1 coding upstream 464018 87946473 ~ 87966277 (+)
LOC110498941 ccdc73 coding upstream 498656 87912532 ~ 87931639 (+)
LOC118942948 ovch2 coding upstream 1076592 87351440 ~ 87353703 (+)
LOC110499106 LOC106561497 coding downstream 192760 88623369 ~ 88630357 (+)
LOC110499113 LOC106561499 coding downstream 231304 88661913 ~ 88667515 (+)
LOC110499119 LOC106573246 coding downstream 260818 88691427 ~ 88726701 (+)
bmt2 bmt2 coding downstream 308286 88738895 ~ 88750469 (+)
tmem168b LOC106561512 coding downstream 320159 88750768 ~ 88758734 (+)
G199870 NA non-coding upstream 99 88429859 ~ 88430196 (+)
G199808 NA non-coding upstream 83880 88346077 ~ 88346415 (+)
G199800 NA non-coding upstream 106376 88323695 ~ 88323919 (+)
G199799 NA non-coding upstream 106713 88323293 ~ 88323582 (+)
G199883 NA non-coding downstream 31982 88462591 ~ 88474033 (+)
G199891 NA non-coding downstream 43887 88474496 ~ 88474706 (+)
G200117 NA non-coding downstream 155052 88585661 ~ 88585904 (+)
G200146 NA non-coding downstream 176021 88606630 ~ 88607045 (+)
G200162 NA non-coding downstream 199875 88630484 ~ 88632486 (+)
G199223 hipk3 other upstream 562328 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 893367 87535936 ~ 87536928 (+)
G198784 NA other upstream 933560 87493623 ~ 87496735 (+)
G198575 NA other upstream 1279805 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1391059 87037511 ~ 87039236 (+)
LOC110499234 rbl2 other downstream 989160 89395057 ~ 89422438 (+)
G202039 NA other downstream 2016509 90447118 ~ 90447573 (+)
G202185 NA other downstream 2286333 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2806416 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2935728 91366282 ~ 91543765 (+)

Expression


Co-expression Network