G200285


Basic Information

Item Value
gene id G200285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88706620 ~ 88708459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU226713
AGTGTAGTTCATCCCTGCCTCGAAACACACTGGTCTGGGGAGCACTGCATATCtgaagagacaagagagagatggatgtcAGAAAACACATGTTTAAAAATACTCctatgacacacacactaaatcaGTGTTTTCAAAGGGGAACCCTCAGGGCGTATACAGGGTGCATACACAGACTCAGAGAATACCTAATATACAGACTCAGAGAATACCTAATATACAGACTCAGAGTCTGCCTAATATACAGACTCAGAGTATACCTAATATACAGACTCAGAGTCTACCTAATATACAGACTCAGAGTCTACCTAATATACAGACTCAGATTCTACCTAATATACAGACTCAGTCTACCTAATATACAGACTCAGAGTCTACCTAATATACAGACTCAGTCTACCTAATATACAGATTCAGAGTCTAACACCTAATATACAGACTCAGAGTCTACCTAATACACAGACTCAGAGTCTACCTAATATACAGACTCAGAGTAGACCTAATACACAGACTCAGAGTCTTCCTAATACACAGACTCAGAGTCTACCACCTAATATACAGACTCAGAGTATACTACCTAATATACAGACTCAGAGTCTACCACCTAATATACAGACTCAGAGTCTGCCTAATATACAGACTCAGAGTCTACCACCTAATATACAGACTCAGAGTCTACCACCTAATATACAGACTCAGAGTCTACCACCTAATATACAGACTCAGAGTTCATCTCTCACACCCACCCACCAGTTACCCAACAGTCCTCCTTCCCCAACACTGACAGAGGAGGCGGTGTGTGTTTACCGTGATCCGGGGTGGAGGGATATCATCTGGTTGTCGTCGTCAGGCATGGTGTTGGCACAGCGACTGTCAGCTGAAATCACACTGGGCCGCATCACCGTCATCAACACCTCCTCCCACTGGTCTGGTAACTACGGCAACGTAACAGATACATTGGTAAACAGGTAAACAAAAGGGTAATGACAGGACCTTGACAAGCAACGACGTTACCTAACATAATCAATTAAGTAAAGAAAGAAATGAAAACCCTCTGACACTCATGTGCCCCGGAGTTTACGTCCATTGGGAAGGCAGTATGTTCTGGGACTGACCTGAGGCTCGTAGCGGATGAGGATGTCGTACTCCATGGAGTGGGGGATGTTGTCAATGGAGAACTCCAGGTAGGCCCCCTCGGGAACATTGACGAAACCTATCCCTGTCCAGGTGGGGCTACGGTCCTGAGGGTGGGGTCTCTGCACTACTGTCACAccctggagatagagagggagaaaagagtaACACGGATTAGTAGGGAACACCCAAGATCCCAGAAGAACTTAGAAGAAGAAAGACACATCAGGGTCATTGGCCAAAGGTAGAAAGGTAACTCACAGGTCCAAATTTTGCGTCCTCTGCCTCGTAGGTGTAGTGGTCCAGGGCGATGAAGTAGAAGCCTGACTCCACCTGGTCACAGCGCCGGCCAAACATGTGTTctcgacacacacactgaccagtcTCCTGGGAAC

Function

NR:

description
PREDICTED: laminin subunit beta-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226713 True 1529 lncRNA 0.46 2 88706620 88708459

Neighbor

gene id symbol gene type direction distance location
LOC110499075 LOC106561496 coding downstream 49668 88630479 ~ 88656952 (-)
LOC110499068 LOC106561495 coding downstream 132417 88569351 ~ 88574203 (-)
dnajc24 dnajc24 coding downstream 501147 88185028 ~ 88205473 (-)
LOC110498933 depdc7 coding downstream 795205 87907499 ~ 87911415 (-)
LOC110498926 hipk3 coding downstream 806195 87859357 ~ 87900425 (-)
znf277 znf277 coding upstream 55099 88763558 ~ 88770972 (-)
LOC110533889 NA coding upstream 97629 88806088 ~ 88807501 (-)
LOC110499152 lrrn3 coding upstream 250913 88959372 ~ 88971921 (-)
amfra LOC106561518 coding upstream 344311 89052770 ~ 89069349 (-)
nfatc3b LOC106561519 coding upstream 371466 89079925 ~ 89100055 (-)
G200240 NA non-coding downstream 80378 88623394 ~ 88626242 (-)
G200109 NA non-coding downstream 137905 88565870 ~ 88568715 (-)
G200041 NA non-coding downstream 227440 88478834 ~ 88479180 (-)
G200039 NA non-coding downstream 230294 88476063 ~ 88476326 (-)
G199948 NA non-coding downstream 383539 88322821 ~ 88323081 (-)
G200492 NA non-coding upstream 70523 88778982 ~ 88781586 (-)
G200496 NA non-coding upstream 75572 88784031 ~ 88784251 (-)
G200714 NA non-coding upstream 334792 89043251 ~ 89044998 (-)
G200716 NA non-coding upstream 337925 89046384 ~ 89048900 (-)
G200724 NA non-coding upstream 362633 89071092 ~ 89071566 (-)
G198912 NA other downstream 1380151 87322139 ~ 87326469 (-)
G198342 LOC100194703 other downstream 1802664 86903036 ~ 86903956 (-)
G197554 NA other downstream 2742955 85959845 ~ 85963665 (-)
G197498 slc25a18 other downstream 2863127 85831239 ~ 85843493 (-)
LOC110498022 LOC106561385 other downstream 4066864 84596433 ~ 84910878 (-)
LOC110499346 vps4a other upstream 898378 89606837 ~ 89609890 (-)
G202279 NA other upstream 1669098 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 2880753 91589212 ~ 91591049 (-)
G204024 NA other upstream 3078728 91787187 ~ 91788103 (-)
LOC110499897 LOC106573100 other upstream 3689601 92398054 ~ 92443838 (-)

Expression


Co-expression Network