G200351


Basic Information

Item Value
gene id G200351
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88807845 ~ 88808071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU226789
gcaaAATAAGAtacaatagggatgaccagggatttgctctttaagtgcgtgaattagaccattttcctgtcctgctaagcattcaaaatgtaacgagtactattgggtgtcagggaaaatgtatggagtaaaaagtacattattttcttcaggcATCTAGTGAAGCAAAAGTAAAAGTcatcaaaaatgtaaatagttaAGTTCAGATACTCAAAAAAATActttag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226789 True 227 lncRNA 0.33 1 88807845 88808071

Neighbor

gene id symbol gene type direction distance location
tmem168b LOC106561512 coding upstream 49111 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 57376 88738895 ~ 88750469 (+)
LOC110499119 LOC106573246 coding upstream 81144 88691427 ~ 88726701 (+)
LOC110499113 LOC106561499 coding upstream 140330 88661913 ~ 88667515 (+)
LOC110499106 LOC106561497 coding upstream 177488 88623369 ~ 88630357 (+)
LOC110502274 immp2l coding downstream 7732 88815803 ~ 88980439 (+)
tdrd12 tdrd12 coding downstream 324862 89132933 ~ 89162092 (+)
ankrd27 ankrd27 coding downstream 360243 89168314 ~ 89202963 (+)
LOC110499234 rbl2 coding downstream 586986 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 662308 89470379 ~ 89472518 (+)
G200335 NA non-coding upstream 23260 88784262 ~ 88784585 (+)
G200331 NA non-coding upstream 26259 88778964 ~ 88781586 (+)
G200219 NA non-coding upstream 77400 88730226 ~ 88730445 (+)
G200218 NA non-coding upstream 78182 88729372 ~ 88729663 (+)
G200162 NA non-coding upstream 175359 88630484 ~ 88632486 (+)
G200372 NA non-coding downstream 35313 88843384 ~ 88843605 (+)
G200457 NA non-coding downstream 180865 88988936 ~ 89041767 (+)
G200651 NA non-coding downstream 235950 89044021 ~ 89044998 (+)
G200652 NA non-coding downstream 238313 89046384 ~ 89048885 (+)
G200653 NA non-coding downstream 241279 89049350 ~ 89049561 (+)
G199223 hipk3 other upstream 939878 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1270917 87535936 ~ 87536928 (+)
G198784 NA other upstream 1311110 87493623 ~ 87496735 (+)
G198575 NA other upstream 1657355 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1768609 87037511 ~ 87039236 (+)
G202039 NA other downstream 1639047 90447118 ~ 90447573 (+)
G202185 NA other downstream 1908871 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2428954 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2558266 91366282 ~ 91543765 (+)

Expression


Co-expression Network