G200457


Basic Information

Item Value
gene id G200457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 88988936 ~ 89041767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU226903
tcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggaatgtattcatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226903 True 234 lncRNA 0.40 2 88988936 89041767

Neighbor

gene id symbol gene type direction distance location
LOC110502274 immp2l coding upstream 8497 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 230202 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 238467 88738895 ~ 88750469 (+)
LOC110499119 LOC106573246 coding upstream 262235 88691427 ~ 88726701 (+)
LOC110499113 LOC106561499 coding upstream 321421 88661913 ~ 88667515 (+)
tdrd12 tdrd12 coding downstream 91166 89132933 ~ 89162092 (+)
ankrd27 ankrd27 coding downstream 126547 89168314 ~ 89202963 (+)
LOC110499234 rbl2 coding downstream 353290 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 428612 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 458745 89500512 ~ 89502349 (+)
G200372 NA non-coding upstream 145331 88843384 ~ 88843605 (+)
G200351 NA non-coding upstream 180865 88807845 ~ 88808071 (+)
G200335 NA non-coding upstream 204351 88784262 ~ 88784585 (+)
G200331 NA non-coding upstream 207350 88778964 ~ 88781586 (+)
G200219 NA non-coding upstream 258491 88730226 ~ 88730445 (+)
G200651 NA non-coding downstream 2254 89044021 ~ 89044998 (+)
G200652 NA non-coding downstream 4617 89046384 ~ 89048885 (+)
G200653 NA non-coding downstream 7583 89049350 ~ 89049561 (+)
G200668 NA non-coding downstream 29769 89071536 ~ 89071845 (+)
G200669 NA non-coding downstream 30233 89072000 ~ 89072369 (+)
G199223 hipk3 other upstream 1120969 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1452008 87535936 ~ 87536928 (+)
G198784 NA other upstream 1492201 87493623 ~ 87496735 (+)
G198575 NA other upstream 1838446 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 1949700 87037511 ~ 87039236 (+)
G202039 NA other downstream 1405351 90447118 ~ 90447573 (+)
G202185 NA other downstream 1675175 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2195258 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2324570 91366282 ~ 91543765 (+)

Expression


Co-expression Network