Gene
RNA
| Item | Value |
|---|---|
| gene id | G200651 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89044021 ~ 89044998 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU227120 | True | 978 | lncRNA | 0.56 | 1 | 89044021 | 89044998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502274 | immp2l | coding | upstream | 63582 | 88815803 ~ 88980439 (+) |
| tmem168b | LOC106561512 | coding | upstream | 285287 | 88750768 ~ 88758734 (+) |
| bmt2 | bmt2 | coding | upstream | 293552 | 88738895 ~ 88750469 (+) |
| LOC110499119 | LOC106573246 | coding | upstream | 317320 | 88691427 ~ 88726701 (+) |
| LOC110499113 | LOC106561499 | coding | upstream | 376506 | 88661913 ~ 88667515 (+) |
| tdrd12 | tdrd12 | coding | downstream | 87935 | 89132933 ~ 89162092 (+) |
| ankrd27 | ankrd27 | coding | downstream | 123316 | 89168314 ~ 89202963 (+) |
| LOC110499234 | rbl2 | coding | downstream | 350059 | 89395057 ~ 89422438 (+) |
| snx20 | snx20 | coding | downstream | 425381 | 89470379 ~ 89472518 (+) |
| mphosph6 | mphosph6 | coding | downstream | 455514 | 89500512 ~ 89502349 (+) |
| G200457 | NA | non-coding | upstream | 2254 | 88988936 ~ 89041767 (+) |
| G200372 | NA | non-coding | upstream | 200416 | 88843384 ~ 88843605 (+) |
| G200351 | NA | non-coding | upstream | 235950 | 88807845 ~ 88808071 (+) |
| G200335 | NA | non-coding | upstream | 259436 | 88784262 ~ 88784585 (+) |
| G200331 | NA | non-coding | upstream | 262435 | 88778964 ~ 88781586 (+) |
| G200652 | NA | non-coding | downstream | 1386 | 89046384 ~ 89048885 (+) |
| G200653 | NA | non-coding | downstream | 4352 | 89049350 ~ 89049561 (+) |
| G200668 | NA | non-coding | downstream | 26538 | 89071536 ~ 89071845 (+) |
| G200669 | NA | non-coding | downstream | 27002 | 89072000 ~ 89072369 (+) |
| G200670 | NA | non-coding | downstream | 28801 | 89073799 ~ 89074036 (+) |
| G199223 | hipk3 | other | upstream | 1176054 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 1507093 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 1547286 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 1893531 | 87150202 ~ 87150490 (+) |
| G198417 | LOC106561459 | other | upstream | 2004785 | 87037511 ~ 87039236 (+) |
| G202039 | NA | other | downstream | 1402120 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 1671944 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 2192027 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 2321339 | 91366282 ~ 91543765 (+) |
