G200668


Basic Information

Item Value
gene id G200668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89071536 ~ 89071845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227138
GCCctacatgccttagatagctcatttgttccaccccccacacatgcggtgacctcacttggcttaactggtgcctctagacaaaacctctctcatcatcactcaatgcataggtttacctccactgtactcagatcctaccatacccttgtctgtacattatgccttgaatctattcttctaAGCCCAGAAATcttctccttttactctctgttccgaacgcactagacatCCTTTTCTTACAGCCTTTAGGCGTACCTTTATCCTACTCCACCTacgttcctctggtgatgtagaggttaacccagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227138 True 310 lncRNA 0.46 1 89071536 89071845

Neighbor

gene id symbol gene type direction distance location
LOC110502274 immp2l coding upstream 91097 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 312802 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 321067 88738895 ~ 88750469 (+)
LOC110499119 LOC106573246 coding upstream 344835 88691427 ~ 88726701 (+)
LOC110499113 LOC106561499 coding upstream 404021 88661913 ~ 88667515 (+)
tdrd12 tdrd12 coding downstream 61088 89132933 ~ 89162092 (+)
ankrd27 ankrd27 coding downstream 96469 89168314 ~ 89202963 (+)
LOC110499234 rbl2 coding downstream 323212 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 398534 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 428667 89500512 ~ 89502349 (+)
G200653 NA non-coding upstream 21975 89049350 ~ 89049561 (+)
G200652 NA non-coding upstream 22651 89046384 ~ 89048885 (+)
G200651 NA non-coding upstream 26538 89044021 ~ 89044998 (+)
G200457 NA non-coding upstream 29769 88988936 ~ 89041767 (+)
G200372 NA non-coding upstream 227931 88843384 ~ 88843605 (+)
G200669 NA non-coding downstream 155 89072000 ~ 89072369 (+)
G200670 NA non-coding downstream 1954 89073799 ~ 89074036 (+)
G200671 NA non-coding downstream 2598 89074443 ~ 89074724 (+)
G200672 NA non-coding downstream 3517 89075362 ~ 89075569 (+)
G200678 NA non-coding downstream 16820 89088665 ~ 89092313 (+)
G199223 hipk3 other upstream 1203569 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1534608 87535936 ~ 87536928 (+)
G198784 NA other upstream 1574801 87493623 ~ 87496735 (+)
G198575 NA other upstream 1921046 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 2032300 87037511 ~ 87039236 (+)
G202039 NA other downstream 1375273 90447118 ~ 90447573 (+)
G202185 NA other downstream 1645097 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2165180 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2294492 91366282 ~ 91543765 (+)

Expression


Co-expression Network