G200671


Basic Information

Item Value
gene id G200671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89074443 ~ 89074724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227141
cgacagagctggtgtaactgagtcaggtttgtaggcctccttgctcgcacacgctttttcagttctgcccacagattttctataggtttgaggtcactcgaataccttgactttgttttccttaaacaattttgctacaactttcgaagtatgcttggggtcattgtccatttcaaagaccaaacagttctatttttatttcatcataccagaggacaTGATgaaaaaaaagtatgatctttgtccccatgtgcagttgcaaaccatagtctggctttttta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227141 True 282 lncRNA 0.46 1 89074443 89074724

Neighbor

gene id symbol gene type direction distance location
LOC110502274 immp2l coding upstream 94004 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 315709 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 323974 88738895 ~ 88750469 (+)
LOC110499119 LOC106573246 coding upstream 347742 88691427 ~ 88726701 (+)
LOC110499113 LOC106561499 coding upstream 406928 88661913 ~ 88667515 (+)
tdrd12 tdrd12 coding downstream 58209 89132933 ~ 89162092 (+)
ankrd27 ankrd27 coding downstream 93590 89168314 ~ 89202963 (+)
LOC110499234 rbl2 coding downstream 320333 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 395655 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 425788 89500512 ~ 89502349 (+)
G200670 NA non-coding upstream 407 89073799 ~ 89074036 (+)
G200669 NA non-coding upstream 2074 89072000 ~ 89072369 (+)
G200668 NA non-coding upstream 2598 89071536 ~ 89071845 (+)
G200653 NA non-coding upstream 24882 89049350 ~ 89049561 (+)
G200652 NA non-coding upstream 25558 89046384 ~ 89048885 (+)
G200672 NA non-coding downstream 638 89075362 ~ 89075569 (+)
G200678 NA non-coding downstream 13941 89088665 ~ 89092313 (+)
G200685 NA non-coding downstream 24935 89099659 ~ 89100034 (+)
G200928 NA non-coding downstream 217856 89292580 ~ 89292872 (+)
G199223 hipk3 other upstream 1206476 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1537515 87535936 ~ 87536928 (+)
G198784 NA other upstream 1577708 87493623 ~ 87496735 (+)
G198575 NA other upstream 1923953 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 2035207 87037511 ~ 87039236 (+)
G202039 NA other downstream 1372394 90447118 ~ 90447573 (+)
G202185 NA other downstream 1642218 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2162301 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2291613 91366282 ~ 91543765 (+)

Expression


Co-expression Network