G200672


Basic Information

Item Value
gene id G200672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89075362 ~ 89075569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227142
gccaaaaccatagtttgttaacaatacatttgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatataaacttctgacttcaactgtacctaggtgtctggttagtcTGTAAACTCTcgttccagactcacattaagcatctccaatccaaaattaaaaaattatcttcctattttgcaacaaagcctccttcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227142 True 208 lncRNA 0.36 1 89075362 89075569

Neighbor

gene id symbol gene type direction distance location
LOC110502274 immp2l coding upstream 94923 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 316628 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 324893 88738895 ~ 88750469 (+)
LOC110499119 LOC106573246 coding upstream 348661 88691427 ~ 88726701 (+)
LOC110499113 LOC106561499 coding upstream 407847 88661913 ~ 88667515 (+)
tdrd12 tdrd12 coding downstream 57364 89132933 ~ 89162092 (+)
ankrd27 ankrd27 coding downstream 92745 89168314 ~ 89202963 (+)
LOC110499234 rbl2 coding downstream 319488 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 394810 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 424943 89500512 ~ 89502349 (+)
G200671 NA non-coding upstream 638 89074443 ~ 89074724 (+)
G200670 NA non-coding upstream 1326 89073799 ~ 89074036 (+)
G200669 NA non-coding upstream 2993 89072000 ~ 89072369 (+)
G200668 NA non-coding upstream 3517 89071536 ~ 89071845 (+)
G200653 NA non-coding upstream 25801 89049350 ~ 89049561 (+)
G200678 NA non-coding downstream 13096 89088665 ~ 89092313 (+)
G200685 NA non-coding downstream 24090 89099659 ~ 89100034 (+)
G200928 NA non-coding downstream 217011 89292580 ~ 89292872 (+)
G200945 NA non-coding downstream 234584 89310153 ~ 89310659 (+)
G199223 hipk3 other upstream 1207395 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1538434 87535936 ~ 87536928 (+)
G198784 NA other upstream 1578627 87493623 ~ 87496735 (+)
G198575 NA other upstream 1924872 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 2036126 87037511 ~ 87039236 (+)
G202039 NA other downstream 1371549 90447118 ~ 90447573 (+)
G202185 NA other downstream 1641373 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 2161456 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2290768 91366282 ~ 91543765 (+)

Expression


Co-expression Network