G200928


Basic Information

Item Value
gene id G200928
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89292580 ~ 89292872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227448
ttgtgttttccttgttttagtgttggtcaggacgtgagctgggtgggcattctatgttgtatgtctagtttgtctatttctatgtttggcctgatatggttctcaatcagaggcaggtgttagtcattgtctctgattgggagccatatttaggtagcctgttttgtgttgggttttgtgggtggttgtttcctgtctttgtgcaccagttaggactgttttggttttcacgtttattgttttgtattctgttcatgttgagttaccttattaaaataacatgaactctaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227448 True 293 lncRNA 0.46 1 89292580 89292872

Neighbor

gene id symbol gene type direction distance location
ankrd27 ankrd27 coding upstream 89617 89168314 ~ 89202963 (+)
tdrd12 tdrd12 coding upstream 130488 89132933 ~ 89162092 (+)
LOC110502274 immp2l coding upstream 312141 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 533846 88750768 ~ 88758734 (+)
bmt2 bmt2 coding upstream 542111 88738895 ~ 88750469 (+)
LOC110499234 rbl2 coding downstream 102185 89395057 ~ 89422438 (+)
snx20 snx20 coding downstream 177507 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 207640 89500512 ~ 89502349 (+)
LOC110499288 LOC106561532 coding downstream 262701 89555573 ~ 89577445 (+)
LOC110499364 LOC106561540 coding downstream 436068 89728940 ~ 89740218 (+)
G200685 NA non-coding upstream 192546 89099659 ~ 89100034 (+)
G200678 NA non-coding upstream 200267 89088665 ~ 89092313 (+)
G200672 NA non-coding upstream 217011 89075362 ~ 89075569 (+)
G200671 NA non-coding upstream 217856 89074443 ~ 89074724 (+)
G200945 NA non-coding downstream 17281 89310153 ~ 89310659 (+)
G201044 NA non-coding downstream 134837 89427709 ~ 89427934 (+)
G201050 NA non-coding downstream 137269 89430141 ~ 89430418 (+)
G201061 NA non-coding downstream 149590 89442462 ~ 89442713 (+)
G201068 NA non-coding downstream 160277 89453149 ~ 89453395 (+)
G199223 hipk3 other upstream 1424613 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1755652 87535936 ~ 87536928 (+)
G198784 NA other upstream 1795845 87493623 ~ 87496735 (+)
G198575 NA other upstream 2142090 87150202 ~ 87150490 (+)
G198417 LOC106561459 other upstream 2253344 87037511 ~ 87039236 (+)
G202039 NA other downstream 1154246 90447118 ~ 90447573 (+)
G202185 NA other downstream 1424070 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1944153 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 2073465 91366282 ~ 91543765 (+)

Expression


Co-expression Network