G201071


Basic Information

Item Value
gene id G201071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89458862 ~ 89459088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227599
CAGGTCGACCACTTTCACCGAAAGCCTCTGCACACTATCCTGCAATGACGTGCATAGCGTCTCTAACTCGCCGATCCTACCAGCGTTGAAATCAGAAGCTTTCTCAAGGTCCACAATACTCTGGCCCTGCTAAGCGACCGTTCGAATGGTGCTCTCGATTTTGGTGTCCAGTTCAGCAATATTGGCCTTAAGATCTTCAGCTAAGGCAACATGTAGTTCTCCCAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227599 True 227 lncRNA 0.49 1 89458862 89459088

Neighbor

gene id symbol gene type direction distance location
LOC110499234 rbl2 coding upstream 36424 89395057 ~ 89422438 (+)
ankrd27 ankrd27 coding upstream 255899 89168314 ~ 89202963 (+)
tdrd12 tdrd12 coding upstream 296770 89132933 ~ 89162092 (+)
LOC110502274 immp2l coding upstream 478423 88815803 ~ 88980439 (+)
tmem168b LOC106561512 coding upstream 700128 88750768 ~ 88758734 (+)
snx20 snx20 coding downstream 11291 89470379 ~ 89472518 (+)
mphosph6 mphosph6 coding downstream 41424 89500512 ~ 89502349 (+)
LOC110499288 LOC106561532 coding downstream 96485 89555573 ~ 89577445 (+)
LOC110499364 LOC106561540 coding downstream 269852 89728940 ~ 89740218 (+)
LOC110499385 LOC106561542 coding downstream 313511 89772599 ~ 89793099 (+)
G201068 NA non-coding upstream 5467 89453149 ~ 89453395 (+)
G201061 NA non-coding upstream 16149 89442462 ~ 89442713 (+)
G201050 NA non-coding upstream 28444 89430141 ~ 89430418 (+)
G201044 NA non-coding upstream 30928 89427709 ~ 89427934 (+)
G200945 NA non-coding upstream 148203 89310153 ~ 89310659 (+)
G201041 NA non-coding downstream 13451 89472539 ~ 89473610 (+)
G201040 NA non-coding downstream 16902 89475990 ~ 89476606 (+)
G201045 NA non-coding downstream 47539 89506627 ~ 89508008 (+)
G201081 NA non-coding downstream 70661 89529749 ~ 89530222 (+)
G201082 NA non-coding downstream 71403 89530491 ~ 89530766 (+)
G199223 hipk3 other upstream 1590895 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1921934 87535936 ~ 87536928 (+)
G198784 NA other upstream 1962127 87493623 ~ 87496735 (+)
G198575 NA other upstream 2308372 87150202 ~ 87150490 (+)
G202039 NA other downstream 988030 90447118 ~ 90447573 (+)
G202185 NA other downstream 1257854 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1777937 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1907249 91366282 ~ 91543765 (+)
G203414 NA other downstream 2162913 91622001 ~ 91624293 (+)

Expression


Co-expression Network