Gene
RNA
| Item | Value |
|---|---|
| gene id | G201515 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89463194 ~ 89468148 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228099 | False | 307 | lncRNA | 0.49 | 2 | 89463194 | 89468148 |
| TU228100 | True | 307 | lncRNA | 0.49 | 2 | 89463194 | 89468148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502285 | sall1 | coding | downstream | 19550 | 89437266 ~ 89443782 (-) |
| LOC110499228 | LOC106561526 | coding | downstream | 254609 | 89205876 ~ 89208585 (-) |
| LOC110499212 | faap24 | coding | downstream | 336015 | 89124306 ~ 89127179 (-) |
| slc7a10b | LOC106561521 | coding | downstream | 339029 | 89106985 ~ 89124165 (-) |
| dus2 | dus2 | coding | downstream | 356467 | 89100257 ~ 89106727 (-) |
| LOC110499252 | papd5 | coding | upstream | 8862 | 89477010 ~ 89493170 (-) |
| hsd17b2 | hsd17b2 | coding | upstream | 33927 | 89502075 ~ 89505985 (-) |
| gpia | LOC100196524 | coding | upstream | 38476 | 89506624 ~ 89528804 (-) |
| lsm14aa | LOC106561533 | coding | upstream | 70350 | 89538498 ~ 89555355 (-) |
| LOC110499327 | LOC106561534 | coding | upstream | 109646 | 89577794 ~ 89587145 (-) |
| G201506 | NA | non-coding | downstream | 11543 | 89451242 ~ 89451651 (-) |
| G201489 | NA | non-coding | downstream | 31903 | 89431061 ~ 89431291 (-) |
| G201485 | NA | non-coding | downstream | 40822 | 89420497 ~ 89422372 (-) |
| G201476 | rbl2 | non-coding | downstream | 56989 | 89405591 ~ 89406205 (-) |
| G201540 | LOC106561532 | non-coding | upstream | 90151 | 89558299 ~ 89559038 (-) |
| G201544 | NA | non-coding | upstream | 105806 | 89573954 ~ 89577425 (-) |
| G201561 | NA | non-coding | upstream | 126444 | 89594592 ~ 89595015 (-) |
| G201627 | NA | non-coding | upstream | 207883 | 89676031 ~ 89677465 (-) |
| G201667 | LOC106561542 | non-coding | upstream | 307351 | 89775499 ~ 89777092 (-) |
| G198912 | NA | other | downstream | 2136725 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 2559238 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 3499529 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 3619701 | 85831239 ~ 85843493 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 4823438 | 84596433 ~ 84910878 (-) |
| LOC110499346 | vps4a | other | upstream | 138689 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 909409 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 2121064 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 2319039 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2929912 | 92398054 ~ 92443838 (-) |
