G201081


Basic Information

Item Value
gene id G201081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89529749 ~ 89530222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227609
CTGCCAATCGTATCCCCTTATTGTTGATTTTTTAATCCAAAATATTTAAGTCATTAATTTGTAAACTTGGAAAAGAGGGAACAACTGTATAATATAACAACGTGTTCTTAATAAGTCCAAGTAAAGGAAGTGAAATTGATTTGAAAACCTTCATGTATTCTCTGAGTAATATTGACCTGAAATTTACCAATGAACTCATCAAATGGCAAAACTCCCCTGTGCTGTCTAACAAATCACATACACAAGTAATACCCTTGTCAAACCAAAcgccatttaaaatgtattcccTCTATTAATTTAATAACTCTATTGTACCAAATCAATGTTTTGTGGGGGGAATCTTCAAAATCACatgcagaccctggttcgattccaggctgtatcacaaccggccgtgattgggagtcccataggcccagcatcatccgggttatggtttgcccggggtaggccgtcattgtaaataagcatttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227609 True 474 lncRNA 0.54 1 89529749 89530222

Neighbor

gene id symbol gene type direction distance location
mphosph6 mphosph6 coding upstream 27400 89500512 ~ 89502349 (+)
snx20 snx20 coding upstream 57231 89470379 ~ 89472518 (+)
LOC110499234 rbl2 coding upstream 107311 89395057 ~ 89422438 (+)
ankrd27 ankrd27 coding upstream 326786 89168314 ~ 89202963 (+)
tdrd12 tdrd12 coding upstream 367657 89132933 ~ 89162092 (+)
LOC110499288 LOC106561532 coding downstream 25351 89555573 ~ 89577445 (+)
LOC110499364 LOC106561540 coding downstream 198718 89728940 ~ 89740218 (+)
LOC110499385 LOC106561542 coding downstream 242377 89772599 ~ 89793099 (+)
LOC110499409 LOC100380677 coding downstream 300700 89830922 ~ 89883245 (+)
LOC110499418 LOC106561545 coding downstream 353135 89883357 ~ 89894419 (+)
G201045 NA non-coding upstream 21741 89506627 ~ 89508008 (+)
G201040 NA non-coding upstream 53143 89475990 ~ 89476606 (+)
G201041 NA non-coding upstream 56139 89472539 ~ 89473610 (+)
G201071 NA non-coding upstream 70661 89458862 ~ 89459088 (+)
G201068 NA non-coding upstream 76354 89453149 ~ 89453395 (+)
G201082 NA non-coding downstream 269 89530491 ~ 89530766 (+)
G201083 NA non-coding downstream 664 89530886 ~ 89531363 (+)
G201085 NA non-coding downstream 3141 89533363 ~ 89533603 (+)
G201086 NA non-coding downstream 4979 89535201 ~ 89535490 (+)
G201087 NA non-coding downstream 5270 89535492 ~ 89535873 (+)
G199223 hipk3 other upstream 1661782 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1992821 87535936 ~ 87536928 (+)
G198784 NA other upstream 2033014 87493623 ~ 87496735 (+)
G198575 NA other upstream 2379259 87150202 ~ 87150490 (+)
G202039 NA other downstream 916896 90447118 ~ 90447573 (+)
G202185 NA other downstream 1186720 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1706803 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1836115 91366282 ~ 91543765 (+)
G203414 NA other downstream 2091779 91622001 ~ 91624293 (+)

Expression


Co-expression Network