G201082


Basic Information

Item Value
gene id G201082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89530491 ~ 89530766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227610
tccgacttggaattccgagtttggatgaccattcaaactGTTTCTTTCCAATCAGATCACATTTTTTTCCTGAGTTCTCAGTTGTCCTGAACGCACTGAACTCGGATAATTCCCGAGTTGTTTTGAATAAGGCATAGTGCCGCGTTCAAAATAACTGGGAATTCTGAATAATACGAGGTCCAATCATGATGTCAATGATCTTCAGGTCGAatgtcggagctctagaaagagtccaGAGTTGGAATTTctagttggatgaccgttcaaatacatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227610 True 276 lncRNA 0.51 1 89530491 89530766

Neighbor

gene id symbol gene type direction distance location
mphosph6 mphosph6 coding upstream 28142 89500512 ~ 89502349 (+)
snx20 snx20 coding upstream 57973 89470379 ~ 89472518 (+)
LOC110499234 rbl2 coding upstream 108053 89395057 ~ 89422438 (+)
ankrd27 ankrd27 coding upstream 327528 89168314 ~ 89202963 (+)
tdrd12 tdrd12 coding upstream 368399 89132933 ~ 89162092 (+)
LOC110499288 LOC106561532 coding downstream 24807 89555573 ~ 89577445 (+)
LOC110499364 LOC106561540 coding downstream 198174 89728940 ~ 89740218 (+)
LOC110499385 LOC106561542 coding downstream 241833 89772599 ~ 89793099 (+)
LOC110499409 LOC100380677 coding downstream 300156 89830922 ~ 89883245 (+)
LOC110499418 LOC106561545 coding downstream 352591 89883357 ~ 89894419 (+)
G201081 NA non-coding upstream 269 89529749 ~ 89530222 (+)
G201045 NA non-coding upstream 22483 89506627 ~ 89508008 (+)
G201040 NA non-coding upstream 53885 89475990 ~ 89476606 (+)
G201041 NA non-coding upstream 56881 89472539 ~ 89473610 (+)
G201071 NA non-coding upstream 71403 89458862 ~ 89459088 (+)
G201083 NA non-coding downstream 120 89530886 ~ 89531363 (+)
G201085 NA non-coding downstream 2597 89533363 ~ 89533603 (+)
G201086 NA non-coding downstream 4435 89535201 ~ 89535490 (+)
G201087 NA non-coding downstream 4726 89535492 ~ 89535873 (+)
G201142 NA non-coding downstream 92125 89622891 ~ 89716417 (+)
G199223 hipk3 other upstream 1662524 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 1993563 87535936 ~ 87536928 (+)
G198784 NA other upstream 2033756 87493623 ~ 87496735 (+)
G198575 NA other upstream 2380001 87150202 ~ 87150490 (+)
G202039 NA other downstream 916352 90447118 ~ 90447573 (+)
G202185 NA other downstream 1186176 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1706259 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1835571 91366282 ~ 91543765 (+)
G203414 NA other downstream 2091235 91622001 ~ 91624293 (+)

Expression


Co-expression Network