G201142


Basic Information

Item Value
gene id G201142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89622891 ~ 89716417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227676
ctgagaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattgggattcaggtctggactttgacttggccattct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227676 True 267 lncRNA 0.45 2 89622891 89716417

Neighbor

gene id symbol gene type direction distance location
LOC110499288 LOC106561532 coding upstream 45446 89555573 ~ 89577445 (+)
mphosph6 mphosph6 coding upstream 120542 89500512 ~ 89502349 (+)
snx20 snx20 coding upstream 150373 89470379 ~ 89472518 (+)
LOC110499234 rbl2 coding upstream 200453 89395057 ~ 89422438 (+)
ankrd27 ankrd27 coding upstream 419928 89168314 ~ 89202963 (+)
LOC110499364 LOC106561540 coding downstream 12523 89728940 ~ 89740218 (+)
LOC110499385 LOC106561542 coding downstream 56182 89772599 ~ 89793099 (+)
LOC110499409 LOC100380677 coding downstream 114505 89830922 ~ 89883245 (+)
LOC110499418 LOC106561545 coding downstream 166940 89883357 ~ 89894419 (+)
LOC110499430 LOC106561547 coding downstream 207874 89924291 ~ 89929501 (+)
G201087 NA non-coding upstream 87018 89535492 ~ 89535873 (+)
G201086 NA non-coding upstream 87401 89535201 ~ 89535490 (+)
G201085 NA non-coding upstream 89288 89533363 ~ 89533603 (+)
G201083 NA non-coding upstream 91528 89530886 ~ 89531363 (+)
G201082 NA non-coding upstream 92125 89530491 ~ 89530766 (+)
G201235 NA non-coding downstream 90508 89806925 ~ 89807763 (+)
G201241 NA non-coding downstream 105356 89821773 ~ 89822363 (+)
G201243 NA non-coding downstream 107279 89823696 ~ 89876082 (+)
G201267 NA non-coding downstream 182315 89898732 ~ 89898970 (+)
G199223 hipk3 other upstream 1754924 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2085963 87535936 ~ 87536928 (+)
G198784 NA other upstream 2126156 87493623 ~ 87496735 (+)
G198575 NA other upstream 2472401 87150202 ~ 87150490 (+)
G202039 NA other downstream 730701 90447118 ~ 90447573 (+)
G202185 NA other downstream 1000525 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1520608 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1649920 91366282 ~ 91543765 (+)
G203414 NA other downstream 1905584 91622001 ~ 91624293 (+)

Expression


Co-expression Network