Gene
RNA
| Item | Value |
|---|---|
| gene id | G201176 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89675961 ~ 89677325 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU227718 | True | 454 | lncRNA | 0.50 | 2 | 89675961 | 89677325 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499288 | LOC106561532 | coding | upstream | 98516 | 89555573 ~ 89577445 (+) |
| mphosph6 | mphosph6 | coding | upstream | 173612 | 89500512 ~ 89502349 (+) |
| snx20 | snx20 | coding | upstream | 203443 | 89470379 ~ 89472518 (+) |
| LOC110499234 | rbl2 | coding | upstream | 253523 | 89395057 ~ 89422438 (+) |
| ankrd27 | ankrd27 | coding | upstream | 472998 | 89168314 ~ 89202963 (+) |
| LOC110499364 | LOC106561540 | coding | downstream | 51615 | 89728940 ~ 89740218 (+) |
| LOC110499385 | LOC106561542 | coding | downstream | 95274 | 89772599 ~ 89793099 (+) |
| LOC110499409 | LOC100380677 | coding | downstream | 153597 | 89830922 ~ 89883245 (+) |
| LOC110499418 | LOC106561545 | coding | downstream | 206032 | 89883357 ~ 89894419 (+) |
| LOC110499430 | LOC106561547 | coding | downstream | 246966 | 89924291 ~ 89929501 (+) |
| G201087 | NA | non-coding | upstream | 140088 | 89535492 ~ 89535873 (+) |
| G201086 | NA | non-coding | upstream | 140471 | 89535201 ~ 89535490 (+) |
| G201085 | NA | non-coding | upstream | 142358 | 89533363 ~ 89533603 (+) |
| G201083 | NA | non-coding | upstream | 144598 | 89530886 ~ 89531363 (+) |
| G201082 | NA | non-coding | upstream | 145195 | 89530491 ~ 89530766 (+) |
| G201235 | NA | non-coding | downstream | 129600 | 89806925 ~ 89807763 (+) |
| G201241 | NA | non-coding | downstream | 144448 | 89821773 ~ 89822363 (+) |
| G201243 | NA | non-coding | downstream | 146371 | 89823696 ~ 89876082 (+) |
| G201267 | NA | non-coding | downstream | 221407 | 89898732 ~ 89898970 (+) |
| G199223 | hipk3 | other | upstream | 1807994 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 2139033 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 2179226 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 2525471 | 87150202 ~ 87150490 (+) |
| G202039 | NA | other | downstream | 769793 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 1039617 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 1559700 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 1689012 | 91366282 ~ 91543765 (+) |
| G203414 | NA | other | downstream | 1944676 | 91622001 ~ 91624293 (+) |
