Item | Value |
---|---|
gene id | G201627 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 89676031 ~ 89677465 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU228228 | True | 962 | lncRNA | 0.50 | 2 | 89676031 | 89677465 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118944147 | NA | coding | downstream | 28517 | 89647462 ~ 89647514 (-) |
LOC110499346 | vps4a | coding | downstream | 67453 | 89606837 ~ 89609890 (-) |
LOC110499327 | LOC106561534 | coding | downstream | 88886 | 89577794 ~ 89587145 (-) |
lsm14aa | LOC106561533 | coding | downstream | 120676 | 89538498 ~ 89555355 (-) |
gpia | LOC100196524 | coding | downstream | 147227 | 89506624 ~ 89528804 (-) |
tph2 | tph2 | coding | upstream | 62724 | 89740189 ~ 89748145 (-) |
LOC110499378 | LOC106561541 | coding | upstream | 74278 | 89751743 ~ 89763372 (-) |
LOC110499401 | lgr5 | coding | upstream | 115654 | 89793119 ~ 89820854 (-) |
LOC110499439 | LOC106561546 | coding | upstream | 224042 | 89901507 ~ 89922720 (-) |
LOC110499460 | LOC100136366 | coding | upstream | 367231 | 90044696 ~ 90125003 (-) |
G201561 | NA | non-coding | downstream | 81016 | 89594592 ~ 89595015 (-) |
G201544 | NA | non-coding | downstream | 98606 | 89573954 ~ 89577425 (-) |
G201540 | LOC106561532 | non-coding | downstream | 116993 | 89558299 ~ 89559038 (-) |
G201515 | NA | non-coding | downstream | 207883 | 89463194 ~ 89468148 (-) |
G201506 | NA | non-coding | downstream | 224380 | 89451242 ~ 89451651 (-) |
G201667 | LOC106561542 | non-coding | upstream | 98034 | 89775499 ~ 89777092 (-) |
G201664 | LOC106561542 | non-coding | upstream | 101637 | 89779102 ~ 89780286 (-) |
G201673 | LOC106561542 | non-coding | upstream | 104329 | 89781794 ~ 89785665 (-) |
G201671 | LOC106561542 | non-coding | upstream | 111421 | 89788886 ~ 89789501 (-) |
G201697 | NA | non-coding | upstream | 154689 | 89832154 ~ 89833151 (-) |
G198912 | NA | other | downstream | 2349562 | 87322139 ~ 87326469 (-) |
G198342 | LOC100194703 | other | downstream | 2772075 | 86903036 ~ 86903956 (-) |
G197554 | NA | other | downstream | 3712366 | 85959845 ~ 85963665 (-) |
G197498 | slc25a18 | other | downstream | 3832538 | 85831239 ~ 85843493 (-) |
G202279 | NA | other | upstream | 700092 | 90377557 ~ 90441425 (-) |
G203915 | rassf9 | other | upstream | 1911747 | 91589212 ~ 91591049 (-) |
G204024 | NA | other | upstream | 2109722 | 91787187 ~ 91788103 (-) |
LOC110499897 | LOC106573100 | other | upstream | 2720595 | 92398054 ~ 92443838 (-) |
G205192 | NA | other | upstream | 3284579 | 92962044 ~ 92962934 (-) |