G201241


Basic Information

Item Value
gene id G201241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89821773 ~ 89822363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227798
gcatggactcactctttgtCCAATAATAGTATTTTCAatcatttttaaatgactacctcatctctggacgccacacatacaattatctgtaagggccctttgagcacggtgaagttattaattacactttggatggtgtatcaatacacccagtcactacaaagatacaggcatccttcctaactcagttgctagtgaggaaggaaactgctcagggatttcaccatgaggccaatggtgactttaaaacagttatagtttaatggctgtgataggagagaacggaggatggatcaacaatattgtagttactccacaatactaacctaaatgacagagtgtaAAGAAGGAAGCCTCGACgcaatacaaatattccaaaacatgcatgctgtttgcaataaggcactaaagtaaaactacaaaaaatgtagcaaagaaattacctttatgtcctgaatacaaagtgttacgtttggggcaaatccaacacaacacatcactgagtaccactcttcatattttcaagcatggtggtggcttcatcttgttatgggtatgcttgtcaacgGCAAGGACTAGGTTGAAactaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227798 True 591 lncRNA 0.37 1 89821773 89822363

Neighbor

gene id symbol gene type direction distance location
LOC110499385 LOC106561542 coding upstream 28674 89772599 ~ 89793099 (+)
LOC110499364 LOC106561540 coding upstream 81555 89728940 ~ 89740218 (+)
LOC110499288 LOC106561532 coding upstream 244328 89555573 ~ 89577445 (+)
mphosph6 mphosph6 coding upstream 319424 89500512 ~ 89502349 (+)
snx20 snx20 coding upstream 349255 89470379 ~ 89472518 (+)
LOC110499409 LOC100380677 coding downstream 8559 89830922 ~ 89883245 (+)
LOC110499418 LOC106561545 coding downstream 60994 89883357 ~ 89894419 (+)
LOC110499430 LOC106561547 coding downstream 101928 89924291 ~ 89929501 (+)
LOC110502295 LOC106561548 coding downstream 114783 89937146 ~ 90043824 (+)
asz1 LOC106561550 coding downstream 308177 90130540 ~ 90170115 (+)
G201235 NA non-coding upstream 14010 89806925 ~ 89807763 (+)
G201142 NA non-coding upstream 105356 89622891 ~ 89716417 (+)
G201176 NA non-coding upstream 144448 89675961 ~ 89677325 (+)
G201087 NA non-coding upstream 285900 89535492 ~ 89535873 (+)
G201086 NA non-coding upstream 286283 89535201 ~ 89535490 (+)
G201243 NA non-coding downstream 1333 89823696 ~ 89876082 (+)
G201267 NA non-coding downstream 76369 89898732 ~ 89898970 (+)
G201268 NA non-coding downstream 76739 89899102 ~ 89899321 (+)
G201275 NA non-coding downstream 84407 89906770 ~ 89907191 (+)
LOC110499234 rbl2 other upstream 399335 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 1953806 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2284845 87535936 ~ 87536928 (+)
G198784 NA other upstream 2325038 87493623 ~ 87496735 (+)
G198575 NA other upstream 2671283 87150202 ~ 87150490 (+)
G202039 NA other downstream 624755 90447118 ~ 90447573 (+)
G202185 NA other downstream 894579 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1414662 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1543974 91366282 ~ 91543765 (+)
G203414 NA other downstream 1799638 91622001 ~ 91624293 (+)

Expression


Co-expression Network