Gene
RNA
| Item | Value |
|---|---|
| gene id | G201699 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89882814 ~ 89883238 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228309 | False | 377 | lncRNA | 0.32 | 1 | 89882814 | 89883190 |
| TU228310 | True | 379 | lncRNA | 0.56 | 1 | 89882860 | 89883238 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499401 | lgr5 | coding | downstream | 61960 | 89793119 ~ 89820854 (-) |
| LOC110499378 | LOC106561541 | coding | downstream | 119442 | 89751743 ~ 89763372 (-) |
| tph2 | tph2 | coding | downstream | 134669 | 89740189 ~ 89748145 (-) |
| LOC110499336 | LOC106561536 | coding | downstream | 173584 | 89610237 ~ 89709230 (-) |
| LOC110499439 | LOC106561546 | coding | upstream | 18269 | 89901507 ~ 89922720 (-) |
| LOC110499460 | LOC100136366 | coding | upstream | 161458 | 90044696 ~ 90125003 (-) |
| LOC110502310 | st7 | coding | upstream | 313993 | 90197231 ~ 90298528 (-) |
| LOC110499482 | LOC100380720 | coding | upstream | 417308 | 90300546 ~ 90321779 (-) |
| met | LOC106561553 | coding | upstream | 454905 | 90338143 ~ 90427147 (-) |
| G201700 | LOC100380677 | non-coding | downstream | 8803 | 89872987 ~ 89874011 (-) |
| G201697 | NA | non-coding | downstream | 49663 | 89832154 ~ 89833151 (-) |
| G201671 | LOC106561542 | non-coding | downstream | 93313 | 89788886 ~ 89789501 (-) |
| G201673 | LOC106561542 | non-coding | downstream | 97149 | 89781794 ~ 89785665 (-) |
| G201664 | LOC106561542 | non-coding | downstream | 102528 | 89779102 ~ 89780286 (-) |
| G201733 | NA | non-coding | upstream | 12185 | 89895423 ~ 89895933 (-) |
| G201734 | NA | non-coding | upstream | 12729 | 89895967 ~ 89896274 (-) |
| G201735 | NA | non-coding | upstream | 16412 | 89899650 ~ 89899935 (-) |
| G201804 | NA | non-coding | upstream | 139806 | 90023044 ~ 90055065 (-) |
| LOC110499346 | vps4a | other | downstream | 272924 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 2556345 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 2978858 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 3919149 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 4039321 | 85831239 ~ 85843493 (-) |
| G202279 | NA | other | upstream | 494319 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 1705974 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1903949 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2514822 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 3078806 | 92962044 ~ 92962934 (-) |
