Gene
RNA
| Item | Value |
|---|---|
| gene id | G201267 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89898732 ~ 89898970 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU227825 | True | 239 | lncRNA | 0.57 | 1 | 89898732 | 89898970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499418 | LOC106561545 | coding | upstream | 4313 | 89883357 ~ 89894419 (+) |
| LOC110499409 | LOC100380677 | coding | upstream | 15487 | 89830922 ~ 89883245 (+) |
| LOC110499385 | LOC106561542 | coding | upstream | 105633 | 89772599 ~ 89793099 (+) |
| LOC110499364 | LOC106561540 | coding | upstream | 158514 | 89728940 ~ 89740218 (+) |
| LOC110499288 | LOC106561532 | coding | upstream | 321287 | 89555573 ~ 89577445 (+) |
| LOC110499430 | LOC106561547 | coding | downstream | 25321 | 89924291 ~ 89929501 (+) |
| LOC110502295 | LOC106561548 | coding | downstream | 38176 | 89937146 ~ 90043824 (+) |
| asz1 | LOC106561550 | coding | downstream | 231570 | 90130540 ~ 90170115 (+) |
| wnt2 | LOC106561551 | coding | downstream | 284311 | 90183281 ~ 90196936 (+) |
| cpa5 | cbpa1 | coding | downstream | 678950 | 90577920 ~ 90594338 (+) |
| G201243 | NA | non-coding | upstream | 22650 | 89823696 ~ 89876082 (+) |
| G201241 | NA | non-coding | upstream | 76369 | 89821773 ~ 89822363 (+) |
| G201235 | NA | non-coding | upstream | 90969 | 89806925 ~ 89807763 (+) |
| G201142 | NA | non-coding | upstream | 182315 | 89622891 ~ 89716417 (+) |
| G201268 | NA | non-coding | downstream | 132 | 89899102 ~ 89899321 (+) |
| G201275 | NA | non-coding | downstream | 7800 | 89906770 ~ 89907191 (+) |
| G201287 | NA | non-coding | downstream | 11111 | 89910081 ~ 89910283 (+) |
| G201322 | NA | non-coding | downstream | 59415 | 89958385 ~ 89959871 (+) |
| G201345 | NA | non-coding | downstream | 109547 | 90008517 ~ 90008904 (+) |
| LOC110499234 | rbl2 | other | upstream | 476294 | 89395057 ~ 89422438 (+) |
| G199223 | hipk3 | other | upstream | 2030765 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 2361804 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 2401997 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 2748242 | 87150202 ~ 87150490 (+) |
| G202039 | NA | other | downstream | 548148 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 817972 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 1338055 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 1467367 | 91366282 ~ 91543765 (+) |
| G203414 | NA | other | downstream | 1723031 | 91622001 ~ 91624293 (+) |
