G201275


Basic Information

Item Value
gene id G201275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89906770 ~ 89907191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227835
TAGGGCACGAGCACCCGACTACATTTAATAAATATTCCAATAATATATTATTTAAAGAACGGGTTCCCATAGTAACCTTGTAGTACTGTAGTCCCGGTGCAGCTTCCTCCTCGGCTCCTGTCAATCTCAGAAGAAACTCCTCCGCCTCCTGGAAACACTGCAGTGCCTGGACACAAATGGGGGTCAGAAAACAGCTACTGGTGCTGCTCTGTCACACCTGTGAAGCAACAACTTTCAGCCACTAAACCTTCTGTACTATCGCCACAACTCTTCATGGTCATAATGACACGTTGAAATGCAACCGCAAcccttaaagtggaactgactgCATTTGAGCAACATGATATCTTATTAAAATATGTTAATGTGAACCCCCAGGAAGCATGacactttttaaaacattttctgacaagtgaGCACTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227835 True 422 lncRNA 0.42 1 89906770 89907191

Neighbor

gene id symbol gene type direction distance location
LOC110499418 LOC106561545 coding upstream 12351 89883357 ~ 89894419 (+)
LOC110499409 LOC100380677 coding upstream 23525 89830922 ~ 89883245 (+)
LOC110499385 LOC106561542 coding upstream 113671 89772599 ~ 89793099 (+)
LOC110499364 LOC106561540 coding upstream 166552 89728940 ~ 89740218 (+)
LOC110499288 LOC106561532 coding upstream 329325 89555573 ~ 89577445 (+)
LOC110499430 LOC106561547 coding downstream 17100 89924291 ~ 89929501 (+)
LOC110502295 LOC106561548 coding downstream 29955 89937146 ~ 90043824 (+)
asz1 LOC106561550 coding downstream 223349 90130540 ~ 90170115 (+)
wnt2 LOC106561551 coding downstream 276090 90183281 ~ 90196936 (+)
cpa5 cbpa1 coding downstream 670729 90577920 ~ 90594338 (+)
G201268 NA non-coding upstream 7449 89899102 ~ 89899321 (+)
G201267 NA non-coding upstream 7800 89898732 ~ 89898970 (+)
G201243 NA non-coding upstream 30688 89823696 ~ 89876082 (+)
G201241 NA non-coding upstream 84407 89821773 ~ 89822363 (+)
G201287 NA non-coding downstream 2890 89910081 ~ 89910283 (+)
G201322 NA non-coding downstream 51194 89958385 ~ 89959871 (+)
G201345 NA non-coding downstream 101326 90008517 ~ 90008904 (+)
G201349 NA non-coding downstream 107585 90014776 ~ 90015047 (+)
G201279 NA non-coding downstream 127762 90034953 ~ 90035952 (+)
LOC110499234 rbl2 other upstream 484332 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2038803 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2369842 87535936 ~ 87536928 (+)
G198784 NA other upstream 2410035 87493623 ~ 87496735 (+)
G198575 NA other upstream 2756280 87150202 ~ 87150490 (+)
G202039 NA other downstream 539927 90447118 ~ 90447573 (+)
G202185 NA other downstream 809751 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1329834 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1459146 91366282 ~ 91543765 (+)
G203414 NA other downstream 1714810 91622001 ~ 91624293 (+)

Expression


Co-expression Network