G201287


Basic Information

Item Value
gene id G201287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89910081 ~ 89910283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227850
GTGGGGCCAGTGGAGCAGGGCTGTGCCCGGGGAGGGGCTGTTCTGCTTAGAGTAGATTTGGGTAATGATGGCCTTCCATGCTACGCTCTGGTAGAACAGCTCCACCACCGTCTGGGGGCTCCGGACTAAGGGGAAAAGAAAACGGAGTGGGATGCAGGGATGTGATCAGGAAAATTCAGACAAAAGTATGATATTGGTTTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227850 True 203 lncRNA 0.54 1 89910081 89910283

Neighbor

gene id symbol gene type direction distance location
LOC110499418 LOC106561545 coding upstream 15662 89883357 ~ 89894419 (+)
LOC110499409 LOC100380677 coding upstream 26836 89830922 ~ 89883245 (+)
LOC110499385 LOC106561542 coding upstream 116982 89772599 ~ 89793099 (+)
LOC110499364 LOC106561540 coding upstream 169863 89728940 ~ 89740218 (+)
LOC110499288 LOC106561532 coding upstream 332636 89555573 ~ 89577445 (+)
LOC110499430 LOC106561547 coding downstream 14008 89924291 ~ 89929501 (+)
LOC110502295 LOC106561548 coding downstream 26863 89937146 ~ 90043824 (+)
asz1 LOC106561550 coding downstream 220257 90130540 ~ 90170115 (+)
wnt2 LOC106561551 coding downstream 272998 90183281 ~ 90196936 (+)
cpa5 cbpa1 coding downstream 667637 90577920 ~ 90594338 (+)
G201275 NA non-coding upstream 2890 89906770 ~ 89907191 (+)
G201268 NA non-coding upstream 10760 89899102 ~ 89899321 (+)
G201267 NA non-coding upstream 11111 89898732 ~ 89898970 (+)
G201243 NA non-coding upstream 33999 89823696 ~ 89876082 (+)
G201322 NA non-coding downstream 48102 89958385 ~ 89959871 (+)
G201345 NA non-coding downstream 98234 90008517 ~ 90008904 (+)
G201349 NA non-coding downstream 104493 90014776 ~ 90015047 (+)
G201279 NA non-coding downstream 124670 90034953 ~ 90035952 (+)
G201379 LOC100136366 non-coding downstream 159007 90069290 ~ 90070243 (+)
LOC110499234 rbl2 other upstream 487643 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2042114 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2373153 87535936 ~ 87536928 (+)
G198784 NA other upstream 2413346 87493623 ~ 87496735 (+)
G198575 NA other upstream 2759591 87150202 ~ 87150490 (+)
G202039 NA other downstream 536835 90447118 ~ 90447573 (+)
G202185 NA other downstream 806659 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1326742 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1456054 91366282 ~ 91543765 (+)
G203414 NA other downstream 1711718 91622001 ~ 91624293 (+)

Expression


Co-expression Network