G201322


Basic Information

Item Value
gene id G201322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 89958385 ~ 89959871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227888
gattcagaggggttgggttaaatgcggaagacacatttttgttgaatgcattcagttgtgcaactgactaggtatccccctttccctattcaactgactaggtatccccctttccctatacaactgactaggtatccccctttccctatacaactgactaggtatccccctttccctacacaactgactaggtatccccctttccctatacaactgactaggtatccccctttccctatacaactgactaggtatccccctttctctatacaactgactaggtatccccctttccctatacaactgactaggtatcccccttccctgtacaactgactaggtatccccctttccctgtacaactgactaggtatcccctttccctatacaactgactaggtatccccctttccctatacaactgactaggtatccccctttccctgtacaactgactaggtatcccctttccctatacaactgactaggta

Function

NR:

description
PREDICTED: translation initiation factor IF-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227888 True 491 lncRNA 0.48 5 89958385 89959871

Neighbor

gene id symbol gene type direction distance location
LOC110499430 LOC106561547 coding upstream 28884 89924291 ~ 89929501 (+)
LOC110499418 LOC106561545 coding upstream 63966 89883357 ~ 89894419 (+)
LOC110499409 LOC100380677 coding upstream 75140 89830922 ~ 89883245 (+)
LOC110499385 LOC106561542 coding upstream 165286 89772599 ~ 89793099 (+)
LOC110499364 LOC106561540 coding upstream 218167 89728940 ~ 89740218 (+)
asz1 LOC106561550 coding downstream 170669 90130540 ~ 90170115 (+)
wnt2 LOC106561551 coding downstream 223410 90183281 ~ 90196936 (+)
cpa5 cbpa1 coding downstream 618049 90577920 ~ 90594338 (+)
LOC110499537 LOC106561558 coding downstream 634579 90594450 ~ 90599294 (+)
poc1b poc1b coding downstream 647219 90607090 ~ 90667412 (+)
G201287 NA non-coding upstream 48102 89910081 ~ 89910283 (+)
G201275 NA non-coding upstream 51194 89906770 ~ 89907191 (+)
G201268 NA non-coding upstream 59064 89899102 ~ 89899321 (+)
G201267 NA non-coding upstream 59415 89898732 ~ 89898970 (+)
G201345 NA non-coding downstream 48646 90008517 ~ 90008904 (+)
G201349 NA non-coding downstream 54905 90014776 ~ 90015047 (+)
G201279 NA non-coding downstream 75082 90034953 ~ 90035952 (+)
G201379 LOC100136366 non-coding downstream 109419 90069290 ~ 90070243 (+)
G201848 NA non-coding downstream 170897 90130768 ~ 90130971 (+)
LOC110499234 rbl2 other upstream 535947 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2090418 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2421457 87535936 ~ 87536928 (+)
G198784 NA other upstream 2461650 87493623 ~ 87496735 (+)
G198575 NA other upstream 2807895 87150202 ~ 87150490 (+)
G202039 NA other downstream 487247 90447118 ~ 90447573 (+)
G202185 NA other downstream 757071 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1277154 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1406466 91366282 ~ 91543765 (+)
G203414 NA other downstream 1662130 91622001 ~ 91624293 (+)

Expression


Co-expression Network